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Correlation property of length sequences based on global structure of the complete genome
Yu, ZG; Anh, VV; Wang, B; Yu, ZG , Queensland Univ Technol, Ctr State Sci & Ind Math, GPO Box 2434, Brisbane, Qld 4001, Australia.
2001
发表期刊PHYSICAL REVIEW E
ISSN1063-651X
卷号63期号:1页码:-
摘要This paper considers three kinds of length sequences of the complete genome. Detrended fluctuation analysis, spectral analysis, and the mean distance spanned within time L are used to discuss the correlation property of these sequences. The values of the exponents from these methods of these three kinds of length sequences of bacteria indicate that the long-range correlations exist in most of these sequences. The correlations have a rich variety of behaviors including the presence of anti-correlations. Furthermore, using the exponent gamma, it is found that these correlations are all linear (gamma = 1.0+/-0.03). It is also found that these sequences exhibit l/f noise in some interval of frequency (f>l). The length of this interval of frequency depends on the length of the sequence. The shape of the periodogram in f>l exhibits some periodicity. The period seems to depend on the length and the complexity of the length sequence.
部门归属Queensland Univ Technol, Ctr State Sci & Ind Math, Brisbane, Qld 4001, Australia; Xiangtan Univ, Dept Math, Xiangtan 411105, Peoples R China; Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China
关键词Long-range Correlations Dna-sequences 1/f Noise
学科领域Physics
收录类别SCI
WOS记录号WOS:000166404900062
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文献类型期刊论文
条目标识符http://ir.itp.ac.cn/handle/311006/12845
专题理论物理所SCI论文
通讯作者Yu, ZG , Queensland Univ Technol, Ctr State Sci & Ind Math, GPO Box 2434, Brisbane, Qld 4001, Australia.
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GB/T 7714
Yu, ZG,Anh, VV,Wang, B,et al. Correlation property of length sequences based on global structure of the complete genome[J]. PHYSICAL REVIEW E,2001,63(1):-.
APA Yu, ZG,Anh, VV,Wang, B,&Yu, ZG , Queensland Univ Technol, Ctr State Sci & Ind Math, GPO Box 2434, Brisbane, Qld 4001, Australia..(2001).Correlation property of length sequences based on global structure of the complete genome.PHYSICAL REVIEW E,63(1),-.
MLA Yu, ZG,et al."Correlation property of length sequences based on global structure of the complete genome".PHYSICAL REVIEW E 63.1(2001):-.
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