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Factorizable language: from dynamics to bacterial complete genomes
Hao, BL; Xie, HM; Yu, ZG; Chen, GY; Hao, BL , Acad Sinica, Inst Theoret Phys, POB 2735, Beijing 100080, Peoples R China.
2000
发表期刊PHYSICA A
ISSN0378-4371
卷号288期号:40912页码:10-20
摘要Symbolic sequences generated by symbolic dynamics of a dynamical system belong to a special class of language in which any admissible word is factorisable as well as prolongable. From a complete genome sequence of an organism, one may also define a factorizable language. A factorizable language enjoys the nice property that it is entirely determined by the set of minimal fobidden words or distinct excluded blocks (DEBs). We use this property to calculate the fractal dimension of patterns related to a visualisation scheme of under-represented strings in bacterial complete genomes within the limit of infinitely long strings. The same problem may be solved by using a purely combinatorial approach. The methods described in this paper may be applied to other regular fractals with self-similar and self-overlapping structure. (C) 2000 Elsevier Science B.V. All rights reserved.
部门归属Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China; Hong Kong Baptist Univ, Dept Phys, Hong Kong, Peoples R China; Hong Kong Baptist Univ, Ctr Nonlinear Studies, Hong Kong, Peoples R China
学科领域Physics
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收录类别SCI
WOS记录号WOS:000165935700003
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文献类型期刊论文
条目标识符http://ir.itp.ac.cn/handle/311006/12854
专题理论物理所SCI论文
通讯作者Hao, BL , Acad Sinica, Inst Theoret Phys, POB 2735, Beijing 100080, Peoples R China.
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Hao, BL,Xie, HM,Yu, ZG,et al. Factorizable language: from dynamics to bacterial complete genomes[J]. PHYSICA A,2000,288(40912):10-20.
APA Hao, BL,Xie, HM,Yu, ZG,Chen, GY,&Hao, BL , Acad Sinica, Inst Theoret Phys, POB 2735, Beijing 100080, Peoples R China..(2000).Factorizable language: from dynamics to bacterial complete genomes.PHYSICA A,288(40912),10-20.
MLA Hao, BL,et al."Factorizable language: from dynamics to bacterial complete genomes".PHYSICA A 288.40912(2000):10-20.
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