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Shih, CT; Su, ZY; Gwan, JF; Hao, BL; Hsieh, CH; Lee, HC; Shih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan.
Mean-field HP model, designability and alpha-helices in protein structures
Source PublicationPHYSICAL REVIEW LETTERS
KeywordFolding Funnels Stability Potentials Mechanism Chains
AbstractAnalysis of the geometric properties of a mean-field HP model on a square lattice for protein structure shows that structures with a large number of switchbacks between surface and core sites are chosen favorably by peptides as unique ground slates. Global comparison of model (binary) peptide sequences with concatenated (binary) protein sequences listed in the Protein Data Bank and the Dali Domain Dictionary indicates that the highest correlation occurs between model peptides choosing the favored structures and those portions of protein sequences containing alpha helices.
2000
ISSN0031-9007
Volume84Issue:2Pages:386-389
Subject AreaPhysics
Indexed BySCI
Citation statistics
Cited Times:32[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.itp.ac.cn/handle/311006/13029
Collection理论物理所科研产出_SCI论文
Corresponding AuthorShih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan.
Recommended Citation
GB/T 7714
Shih, CT,Su, ZY,Gwan, JF,et al. Mean-field HP model, designability and alpha-helices in protein structures[J]. PHYSICAL REVIEW LETTERS,2000,84(2):386-389.
APA Shih, CT.,Su, ZY.,Gwan, JF.,Hao, BL.,Hsieh, CH.,...&Shih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan..(2000).Mean-field HP model, designability and alpha-helices in protein structures.PHYSICAL REVIEW LETTERS,84(2),386-389.
MLA Shih, CT,et al."Mean-field HP model, designability and alpha-helices in protein structures".PHYSICAL REVIEW LETTERS 84.2(2000):386-389.
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