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Mean-field HP model, designability and alpha-helices in protein structures
Shih, CT; Su, ZY; Gwan, JF; Hao, BL; Hsieh, CH; Lee, HC; Shih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan.
2000
发表期刊PHYSICAL REVIEW LETTERS
ISSN0031-9007
卷号84期号:2页码:386-389
摘要Analysis of the geometric properties of a mean-field HP model on a square lattice for protein structure shows that structures with a large number of switchbacks between surface and core sites are chosen favorably by peptides as unique ground slates. Global comparison of model (binary) peptide sequences with concatenated (binary) protein sequences listed in the Protein Data Bank and the Dali Domain Dictionary indicates that the highest correlation occurs between model peptides choosing the favored structures and those portions of protein sequences containing alpha helices.
部门归属Natl Ctr High Performance Comp, Hsinchu, Taiwan; Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China; Natl Ctr Theoret Sci, Hsinchu, Taiwan; Natl Cent Univ, Dept Phys, Chungli 32054, Taiwan; Natl Cent Univ, Ctr Complex Syst, Chungli 32054, Taiwan
关键词Folding Funnels Stability Potentials Mechanism Chains
学科领域Physics
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收录类别SCI
WOS记录号WOS:000084661500045
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被引频次:32[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.itp.ac.cn/handle/311006/13029
专题理论物理所1978-2010年知识产出
通讯作者Shih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan.
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GB/T 7714
Shih, CT,Su, ZY,Gwan, JF,et al. Mean-field HP model, designability and alpha-helices in protein structures[J]. PHYSICAL REVIEW LETTERS,2000,84(2):386-389.
APA Shih, CT.,Su, ZY.,Gwan, JF.,Hao, BL.,Hsieh, CH.,...&Shih, CT , Natl Ctr High Performance Comp, Hsinchu, Taiwan..(2000).Mean-field HP model, designability and alpha-helices in protein structures.PHYSICAL REVIEW LETTERS,84(2),386-389.
MLA Shih, CT,et al."Mean-field HP model, designability and alpha-helices in protein structures".PHYSICAL REVIEW LETTERS 84.2(2000):386-389.
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