Knowledge Management System of Institute of Theoretical Physics, CAS
Yu, J; Hu, SN; Wang, J; Wong, GKS; Li, SG; Liu, B; Deng, YJ; Dai, L; Zhou, Y; Zhang, XQ; Cao, ML; Liu, J; Sun, JD; Tang, JB; Chen, YJ; Huang, XB; Lin, W; Ye, C; Tong, W; Cong, LJ; Geng, JN; Han, YJ; Li, L![]() ![]() ![]() | |
A draft sequence of the rice genome (Oryza sativa L. ssp indica) | |
Source Publication | SCIENCE
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Keyword | Transposable Elements Arabidopsis-thaliana Human Genes Comparative Genetics Biallelic Markers Grass Genomes Cpg Islands Dna Plants Identification |
Abstract | We have produced a draft sequence of the rice genome for the most widely cultivated subspecies in China, Oryza sativa L. ssp. indica, by whole-genome shotgun sequencing. The genome was 466 megabases in size, with an estimated 46,022 to 55,615 genes. Functional coverage in the assembled sequences was 92.0%. About 42.2% of the genome was in exact 20-nucleotide oligomer repeats, and most of the transposons were in the intergenic regions between genes. Although 80.6% of predicted Arabidopsis thaliana genes had a homolog in rice, only 49.4% of predicted rice genes had a homolog in A. thaliana. The large proportion of rice genes with no recognizable homologs is due to a gradient in the GC-content of rice coding sequences. |
2002 | |
ISSN | 0036-8075 |
Volume | 296Issue:5565Pages:79-92 |
Subject Area | Physics |
Indexed By | SCI |
Citation statistics | |
Document Type | 期刊论文 |
Identifier | http://ir.itp.ac.cn/handle/311006/13544 |
Collection | SCI期刊论文 |
Corresponding Author | Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China. |
Recommended Citation GB/T 7714 | Yu, J,Hu, SN,Wang, J,et al. A draft sequence of the rice genome (Oryza sativa L. ssp indica)[J]. SCIENCE,2002,296(5565):79-92. |
APA | Yu, J.,Hu, SN.,Wang, J.,Wong, GKS.,Li, SG.,...&Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China..(2002).A draft sequence of the rice genome (Oryza sativa L. ssp indica).SCIENCE,296(5565),79-92. |
MLA | Yu, J,et al."A draft sequence of the rice genome (Oryza sativa L. ssp indica)".SCIENCE 296.5565(2002):79-92. |
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A Draft Sequence of (1369KB) | 开放获取 | License | Application Full Text |
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