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题名: Prokaryotic branch of the Tree of Life: A composition vector approach
作者: Bai-Lin Hao ;  Lei Gao
刊名: JOURNAL OF SYSTEMATICS AND EVOLUTION
出版日期: 2008
卷号: 46, 期号:3, 页码:258-262
关键词: MOLECULAR PHYLOGENY ;  SEQUENCE ALIGNMENT ;  GENOMES ;  RECONSTRUCTION ;  PROTEINS
学科分类: Physics
通讯作者: Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
部门归属: [Hao, BL] Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China; [Hao, BL; Gao, L] Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China; [Hao, BL] Santa Fe Inst, Santa Fe, NM 87501 USA
英文摘要: The Composition Vector Tree (CVTree) is a parameter-free and alignment-free method to infer prokaryotic phylogeny from their complete genomes. It is distinct from the traditional 16S rRNA analysis in both the input data and the methodology. The prokaryotic phylogenetic trees constructed by using the CVTree method agree well with the Bergey's taxonomy in all major groupings and fine branching patterns. Thus, combined use of the CVTree approach and the 16S rRNA analysis may provide an objective and reliable reconstruction of the prokaryotic branch of the Tree of Life.
收录类别: SCI
原文出处: 查看原文
WOS记录号: WOS:000256878000003
Citation statistics: 
内容类型: 期刊论文
URI标识: http://ir.itp.ac.cn/handle/311006/5542
Appears in Collections:理论物理所1978-2010年知识产出_期刊论文

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Recommended Citation:
Bai-Lin Hao,Lei Gao. Prokaryotic branch of the Tree of Life: A composition vector approach[J]. JOURNAL OF SYSTEMATICS AND EVOLUTION,2008,46(3):258-262.
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