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Prokaryotic branch of the Tree of Life: A composition vector approach
Bai-Lin Hao; Lei Gao; Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
2008
发表期刊JOURNAL OF SYSTEMATICS AND EVOLUTION
ISSN1674-4918
卷号46期号:3页码:258-262
摘要The Composition Vector Tree (CVTree) is a parameter-free and alignment-free method to infer prokaryotic phylogeny from their complete genomes. It is distinct from the traditional 16S rRNA analysis in both the input data and the methodology. The prokaryotic phylogenetic trees constructed by using the CVTree method agree well with the Bergey's taxonomy in all major groupings and fine branching patterns. Thus, combined use of the CVTree approach and the 16S rRNA analysis may provide an objective and reliable reconstruction of the prokaryotic branch of the Tree of Life.
部门归属[Hao, BL] Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China; [Hao, BL; Gao, L] Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China; [Hao, BL] Santa Fe Inst, Santa Fe, NM 87501 USA
关键词Molecular Phylogeny Sequence Alignment Genomes Reconstruction Proteins
学科领域Physics
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收录类别SCI
WOS记录号WOS:000256878000003
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被引频次:4[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.itp.ac.cn/handle/311006/5542
专题理论物理所SCI论文
通讯作者Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
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GB/T 7714
Bai-Lin Hao,Lei Gao,Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China. Prokaryotic branch of the Tree of Life: A composition vector approach[J]. JOURNAL OF SYSTEMATICS AND EVOLUTION,2008,46(3):258-262.
APA Bai-Lin Hao,Lei Gao,&Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China.(2008).Prokaryotic branch of the Tree of Life: A composition vector approach.JOURNAL OF SYSTEMATICS AND EVOLUTION,46(3),258-262.
MLA Bai-Lin Hao,et al."Prokaryotic branch of the Tree of Life: A composition vector approach".JOURNAL OF SYSTEMATICS AND EVOLUTION 46.3(2008):258-262.
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