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Gao, Lei; Qi, Ji; Sun, JianDong; Hao, BaiLin; Hao, BL , Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China
Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology
Source PublicationSCIENCE IN CHINA SERIES C-LIFE SCIENCES
KeywordGenome Reconstruction Sequence Life Prochlorococcus Evolution
AbstractWe perform an exhaustive, taxon by taxon, comparison of the branchings in the composition vector trees (CVTrees) inferred from 432 prokaryotic genomes available on 31,December 2006, with the bacteriologists' taxonomy-primarily the latest online Outline of the Bergey's Manual of Systematic Bacteriology. The CVTree phylogeny agrees very well with the Bergey's taxonomy in majority of fine branchings and overall structures. At the same time most of the differences between the trees and the Manual have been known to biologists to some extent and may hint at taxonomic revisions. Instead of demonstrating the overwhelming agreement this paper puts emphasis on the biological implications of the differences.
2007
ISSN1006-9305
Volume50Issue:5Pages:587-599
Subject AreaPhysics
Indexed BySCI
Citation statistics
Document Type期刊论文
Identifierhttp://ir.itp.ac.cn/handle/311006/5648
Collection理论物理所科研产出_SCI论文
Corresponding AuthorHao, BL , Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China
Recommended Citation
GB/T 7714
Gao, Lei,Qi, Ji,Sun, JianDong,et al. Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology[J]. SCIENCE IN CHINA SERIES C-LIFE SCIENCES,2007,50(5):587-599.
APA Gao, Lei,Qi, Ji,Sun, JianDong,Hao, BaiLin,&Hao, BL , Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China.(2007).Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology.SCIENCE IN CHINA SERIES C-LIFE SCIENCES,50(5),587-599.
MLA Gao, Lei,et al."Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology".SCIENCE IN CHINA SERIES C-LIFE SCIENCES 50.5(2007):587-599.
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