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题名: Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology
作者: Gao, Lei ;  Qi, Ji ;  Sun, JianDong ;  Hao, BaiLin
刊名: SCIENCE IN CHINA SERIES C-LIFE SCIENCES
出版日期: 2007
卷号: 50, 期号:5, 页码:587-599
关键词: GENOME ;  RECONSTRUCTION ;  SEQUENCE ;  LIFE ;  PROCHLOROCOCCUS ;  EVOLUTION
学科分类: Physics
通讯作者: Hao, BL , Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China
部门归属: Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China; Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China; Chinese Acad Sci, Beijing Genom Inst, Beijing 101300, Peoples R China; Santa Fe Inst, Santa Fe, NM 87501 USA
英文摘要: We perform an exhaustive, taxon by taxon, comparison of the branchings in the composition vector trees (CVTrees) inferred from 432 prokaryotic genomes available on 31,December 2006, with the bacteriologists' taxonomy-primarily the latest online Outline of the Bergey's Manual of Systematic Bacteriology. The CVTree phylogeny agrees very well with the Bergey's taxonomy in majority of fine branchings and overall structures. At the same time most of the differences between the trees and the Manual have been known to biologists to some extent and may hint at taxonomic revisions. Instead of demonstrating the overwhelming agreement this paper puts emphasis on the biological implications of the differences.
收录类别: SCI
原文出处: 查看原文
WOS记录号: WOS:000250583300003
Citation statistics: 
内容类型: 期刊论文
URI标识: http://ir.itp.ac.cn/handle/311006/5648
Appears in Collections:理论物理所1978-2010年知识产出_期刊论文

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Recommended Citation:
Gao, Lei,Qi, Ji,Sun, JianDong,et al. Prokaryote phylogeny meets taxonomy: An exhaustive comparison of composition vector trees with systematic bacteriology[J]. SCIENCE IN CHINA SERIES C-LIFE SCIENCES,2007,50(5):587-599.
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