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Factorizable language revisited from dynamics to biology
Hao, Bailin; Xie, Huimin; Hao, B , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
2007
发表期刊INTERNATIONAL JOURNAL OF MODERN PHYSICS B
ISSN0217-9792
卷号21期号:23-24页码:4076-4081
摘要A formal language is called factorizable if any substring of a word in it also belongs to the language. Symbolic sequences from symbolic dynamics make factorizable languages by definition. In studying avoided and under-represented strings in bacterial genomes we have defined a factorizable language for each complete genome. Recently, in studying the problem of uniqueness of reconstruction of a protein sequence from its constituent K-peptides we encounter again factorizable language which helps to build a finite state automaton to recognize the uniqueness of reconstruction. We present a brief review of these applications of factorizable languages from dynamics to biology.
部门归属[Hao, B] Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China; [Hao, B] Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China; [Xie, H] Suzhou Univ, Dept Math, Suzhou 215006, Peoples R China
关键词Genomes
学科领域Physics
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收录类别SCI
WOS记录号WOS:000251997500035
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被引频次:1[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.itp.ac.cn/handle/311006/5657
专题理论物理所1978-2010年知识产出
通讯作者Hao, B , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
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Hao, Bailin,Xie, Huimin,Hao, B , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China. Factorizable language revisited from dynamics to biology[J]. INTERNATIONAL JOURNAL OF MODERN PHYSICS B,2007,21(23-24):4076-4081.
APA Hao, Bailin,Xie, Huimin,&Hao, B , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China.(2007).Factorizable language revisited from dynamics to biology.INTERNATIONAL JOURNAL OF MODERN PHYSICS B,21(23-24),4076-4081.
MLA Hao, Bailin,et al."Factorizable language revisited from dynamics to biology".INTERNATIONAL JOURNAL OF MODERN PHYSICS B 21.23-24(2007):4076-4081.
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