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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition 期刊论文
MSYSTEMS, 2020, 卷号: 5, 期号: 5, 页码: e00575-20
Authors:  Zhang, Qing;  Brambilla, Elisa;  Li, Rui;  Shi, Hualin;  Lagomarsino, Marco Cosentino;  Sclavi, Bianca
Adobe PDF(698Kb)  |  Favorite  |  View/Download：8/0  |  Submit date：2020/11/26
RNA-POLYMERASE AVAILABILITY  ESCHERICHIA-COLI  RIBOSOMAL-RNA  GENE-EXPRESSION  PPGPP  EFFICIENCY  PROMOTERS  SUBUNITS  (P)PPGPP  REVEALS  
基因组时代的计算微生物学 期刊论文
中国科学:生命科学, 2017, 卷号: 47, 期号: 02, 页码: 159-170
Authors:  左光宏;  郝柏林
Adobe PDF(1524Kb)  |  Favorite  |  View/Download：114/0  |  Submit date：2019/09/06
原核生物  亲缘树  分类系统  不用序列联配的基因组比较  Cvtree  Lvtree  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
Adobe PDF(3698Kb)  |  Favorite  |  View/Download：144/0  |  Submit date：2017/12/21
The bulk and the tail of minimal absent words in genome sequences 期刊论文
PHYSICAL BIOLOGY, 2016, 卷号: 13, 期号: 2, 页码: 26004
Authors:  Aurell, E;  Innocenti, N;  Zhou, HJ;  Innocenti, N (reprint author), Hebrew Univ Jerusalem, Sch Comp Sci & Engn, IL-91904 Jerusalem, Israel.
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Minimal Absent Words  Copy-mutation Evolution Model  Random Sequence  
Self-organizing approach for meta-genomes 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2014, 卷号: 53, 期号: Part A, 页码: 118-124
Authors:  Zhu, JF;  Zheng, WM;  Zheng, WM (reprint author), Acad Sinica, Inst Theoret Phys, Beijing 100190, Peoples R China.
Adobe PDF(725Kb)  |  Favorite  |  View/Download：119/7  |  Submit date：2015/06/03
Protein-coding Regions  Microbial Genomes  Dna  Sequences  Diversity  Obesity  Flora  
Whole-Genome Based Bacterial Phylogeny and Taxonomy Using Composition Vector (CVTree) Method 会议论文
, 中国浙江杭州
Authors:  Hao BL(郝柏林)
Favorite  |  View/Download：51/0  |  Submit date：2019/09/10
Whole-Genome Based Bacterial Phylogeny and Taxonomy Using Composition Vector  Method  CVTree  
Prokaryotic branch of the Tree of Life: A composition vector approach 期刊论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, 2008, 卷号: 46, 期号: 3, 页码: 258-262
Authors:  Bai-Lin Hao;  Lei Gao;  Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China
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Molecular Phylogeny  Sequence Alignment  Genomes  Reconstruction  Proteins  
Prokaryotic branch of the Tree of Life: A composition vector approach 会议论文
JOURNAL OF SYSTEMATICS AND EVOLUTION, Beijing, PEOPLES R CHINA, JUN 03-07, 2007
Authors:  Hao, BL;  Gao, L
Favorite  |  View/Download：49/0  |  Submit date：2019/07/24
MOLECULAR PHYLOGENY  SEQUENCE ALIGNMENT  GENOMES  RECONSTRUCTION  PROTEINS  
原核生物系统发生学与分类学的一致性:组份矢量树与原核生物分类系统的详尽比较 期刊论文
中国科学(C辑:生命科学), 2007, 期号: 04, 页码: 389-401
Authors:  高雷;  戚继;  孙健冬;  郝柏林
Favorite  |  View/Download：67/0  |  Submit date：2019/09/06
组分矢量方法  伯杰分类  原核生物亲缘树  原核生物分类  系统发生  CVTree  16S rRNA