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Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Anchor Effect of Interactions Between Kinesin's Nucleotide-Binding Pocket and Microtubule 期刊论文
CELLULAR AND MOLECULAR BIOENGINEERING, 2017, 卷号: 10, 期号: 2, 页码: 162-173
Authors:  Jin, YM;  Geng, YZ;  Lu, LN;  Ma, YL;  Lu, G;  Zhang, H;  Ji, Q;  Geng, YZ (reprint author), Hebei Univ Technol, Sch Sci, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Kinesin  Microtubule  Nucleotide-binding Pocket  Anchor Effect  
Energy-efficient population coding constrains network size of a neuronal array system 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 19369
Authors:  Yu, LC;  Zhang, C;  Liu, LW;  Yu, YG;  Yu, YG (reprint author), Fudan Univ, Ctr Computat Syst Biol, Collaborat Innovat Ctr Brain Sci, Sch Life Sci, Shanghai 200433, Peoples R China.
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Mechanism of pyrophosphate ion release in T7 RNA polymerase revealed by free energy simulations 期刊论文
COMPUTATIONAL AND THEORETICAL CHEMISTRY, 2016, 卷号: 1094, 页码: 127-132
Authors:  Wu, SG;  Jiang, MQ;  Liu, L;  Wu, SG (reprint author), Sichuan Normal Univ, Coll Chem & Mat Sci, Chengdu 610068, Peoples R China.
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Molecular Dynamics Simulation  T7 Rna Polymerase  Ppi Release  Potential Of Mean Force  
F-1-ATPase Stabilizes and Positions Adenosine Triphosphate Revealed by Molecular Dynamics Simulations 期刊论文
ACTA PHYSICO-CHIMICA SINICA, 2015, 卷号: 31, 期号: 9, 页码: 1803-1809
Authors:  Wu, SG;  Gao, XT;  Li, Q;  Liao, J;  Xu, CG;  Wu, SG (reprint author), Sichuan Normal Univ, Coll Chem & Mat Sci, Chengdu 610068, Peoples R China.
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F-1-atpase  Hydrogen Bond  Molecular Dynamics  Mutation  
F0F1-ATPase STATOR REGULATION STUDIED WITH A RESONANCE MODEL 期刊论文
BIODEVICES: PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON BIOMEDICAL ELECTRONICS AND DEVICES, 2012, 页码: 132-137
Authors:  Shu, YG;  Ou-Yang, ZC;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Atp Synthase  Molecular Machine  Proton Transport  F-1-atpase  Rotation  Driven  Mechanism  Kinetics  Motors  
F0F1-ATPase STATOR REGULATION STUDIED WITH A RESONANCE MODEL 会议论文
BIODEVICES: PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON BIOMEDICAL ELECTRONICS AND DEVICES, PORTUGAL, FEB 01-04, 2012
Authors:  Shu, YG;  Ou-Yang, ZC
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ATP SYNTHESIS  PROTON TRANSPORT  F-1-ATPASE  SYNTHASE  ROTATION  DRIVEN  MECHANISM  KINETICS  
F(0)F(1)-ATPase activity regulated by external links on beta subunits 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2010, 卷号: 391, 期号: 1, 页码: 182-186
Authors:  Cheng, Jie;  Zhang, Xiao-ai;  Shu, Yao-Gen;  Yue, Jia-Chang;  Shu, YG , Chinese Acad Sci, Inst Theoret Phys, Key Lab Frontiers Theoret Phys, Beijing 100190, Peoples R China
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Atp Synthase  Rhodospirillum-rubrum  Quantum Dots  Proton Flux  F-1-atpase  Driven  Purification  Transport  F1-atpase  Rotation  
Systematic Kinetics Study of FoF1-ATPase: Analytic Results and Comparison with Experiments 期刊论文
JOURNAL OF PHYSICAL CHEMISTRY B, 2008, 卷号: 112, 期号: 42, 页码: 13453-13459
Authors:  Shu, Yao-Gen;  Lai, Pik-Yin;  Shu, YG , Natl Cent Univ, Grad Inst Biophys, Dept Phys, Chungli 320, Taiwan
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3 Catalytic Sites  Bovine Heart-mitochondria  Atp Synthase Catalysis  Escherichia-coli  Substrate-binding  Molecular Motors  Proton-transport  Oxidative-phosphorylation  Energy Transduction  F1f0-atp Synthase  
Master equation approach to molecular motor 期刊论文
CHINESE PHYSICS LETTERS, 2005, 卷号: 22, 期号: 2, 页码: 503-506
Authors:  Feng, J;  Zhuo, YZ;  Zhuo, YZ , China Univ Geosci, Coll Mat Sci & Technol, Beijing 100083, Peoples R China.
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Single Kinesin Molecules  Myosin-v  Protein Kinetics  Mechanism  Dynamics  Atpase  Cycle  Model