ITP OpenIR

Browse/Search Results:  1-10 of 38 Help

Selected(0)Clear Items/Page:    Sort:
A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition 期刊论文
MSYSTEMS, 2020, 卷号: 5, 期号: 5, 页码: e00575-20
Authors:  Zhang, Qing;  Brambilla, Elisa;  Li, Rui;  Shi, Hualin;  Lagomarsino, Marco Cosentino;  Sclavi, Bianca
Favorite  |  View/Download:1/0  |  Submit date:2020/11/26
RNA-POLYMERASE AVAILABILITY  ESCHERICHIA-COLI  RIBOSOMAL-RNA  GENE-EXPRESSION  PPGPP  EFFICIENCY  PROMOTERS  SUBUNITS  (P)PPGPP  REVEALS  
Trade-offs between effectiveness and cost in bifunctional enzyme circuit with concentration robustness 期刊论文
PHYSICAL REVIEW E, 2020, 卷号: 101, 期号: 1, 页码: 12409
Authors:  Guan, Shaohua;  Xu, Liufang;  Zhang, Qing;  Shi, Hualin
Favorite  |  View/Download:39/0  |  Submit date:2020/06/16
CHEMICAL-SYSTEMS  GENE-EXPRESSION  PHOSPHORYLATION  NOISE  ORIGINS  GROWTH  SPEED  OMPR  ATP  
Quantitative Connection between Cell Size and Growth Rate by Phospholipid Metabolism 期刊论文
CELLS, 2020, 卷号: 9, 期号: 2, 页码: 391
Authors:  Zhang, Zhichao;  Zhang, Qing;  Guan, Shaohua;  Shi, Hualin
Favorite  |  View/Download:28/0  |  Submit date:2020/06/16
HAEMOPHILUS-INFLUENZAE RD  GRAM-NEGATIVE BACTERIA  ESCHERICHIA-COLI  OUTER-MEMBRANE  FATTY-ACID  GUANOSINE TETRAPHOSPHATE  CARDIOLIPIN SYNTHASE  ADAPTIVE EVOLUTION  ENVELOPE  MODEL  
DCA for genome-wide epistasis analysis: the statistical genetics perspective 期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:  Gao, CY;  Cecconi, F;  Vulpiani, A;  Zhou, HJ;  Aurell, E
Adobe PDF(1652Kb)  |  Favorite  |  View/Download:98/1  |  Submit date:2019/07/19
DIRECT-COUPLING ANALYSIS  PROTEIN-STRUCTURE  CONTACTS  HIV  IDENTIFICATION  RECOMBINATION  LINKAGE  LANDSCAPE  INFERENCE  MODEL  
Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder 期刊论文
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2018, 卷号: 36, 期号: 9, 页码: 2331-2341
Authors:  Faraggi, E;  Dunker, AK;  Sussman, JL;  Kloczkowski, A
Adobe PDF(703Kb)  |  Favorite  |  View/Download:84/0  |  Submit date:2018/12/27
BACKBONE TORSION ANGLES  MAJOR URINARY PROTEIN  INTRINSIC DISORDER  STRUCTURE PREDICTION  SECONDARY STRUCTURE  CRYSTAL-STRUCTURE  DYNAMICS  DIFFRACTION  CRYSTALLOGRAPHY  RECOGNITION  
Optimal Allocation of Bacterial Protein Resources under Nonlethal Protein Maturation Stress 期刊论文
BIOPHYSICAL JOURNAL, 2018, 卷号: 115, 期号: 5, 页码: 896-910
Authors:  Zhang, Q;  Li, R;  Li, JB;  Shi, HL
Adobe PDF(765Kb)  |  Favorite  |  View/Download:95/0  |  Submit date:2018/12/27
ESCHERICHIA-COLI PROTEOME  SIGMA-FACTOR COMPETITION  GENE-EXPRESSION  RNA-POLYMERASE  OXIDATIVE STRESS  GROWTH-INHIBITION  CELL-GROWTH  TRANSLATION  RATES  OVERPRODUCTION  
Anomalous boundary deformation induced by enclosed active particles 期刊论文
CHINESE PHYSICS B, 2017, 卷号: 26, 期号: 10, 页码: 100502
Authors:  Tian, WD;  Gu, Y;  Guo, YK;  Chen, K;  Chen, K (reprint author), Soochow Univ, Coll Phys Optoelect & Energy, Ctr Soft Condensed Matter Phys & Interdisciplinar, Suzhou 215006, Peoples R China.;  Chen, K (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China, Beijing 100190, Peoples R China.
Adobe PDF(1186Kb)  |  Favorite  |  View/Download:97/2  |  Submit date:2017/12/21
Self-propelled Particles  Boundary  Active Matter  c Onfinement  
基因组时代的计算微生物学 期刊论文
中国科学:生命科学, 2017, 卷号: 47, 期号: 02, 页码: 159-170
Authors:  左光宏;  郝柏林
Adobe PDF(1524Kb)  |  Favorite  |  View/Download:100/0  |  Submit date:2019/09/06
原核生物  亲缘树  分类系统  不用序列联配的基因组比较  Cvtree  Lvtree  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
Adobe PDF(3698Kb)  |  Favorite  |  View/Download:136/0  |  Submit date:2017/12/21
On the relevance of the maximum entropy principle in non-equilibrium statistical mechanics 期刊论文
EUROPEAN PHYSICAL JOURNAL-SPECIAL TOPICS, 2017, 卷号: 226, 期号: 10, 页码: 2327-2343
Authors:  Auletta, G;  Rondoni, L;  Vulpiani, A;  Auletta, G (reprint author), Univ Cassino, I-03043 Cassino, Italy.
Adobe PDF(238Kb)  |  Favorite  |  View/Download:67/2  |  Submit date:2017/12/21