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Kinetic assays of DNA polymerase fidelity: A theoretical perspective beyond Michaelis-Menten kinetics 期刊论文
PHYSICAL REVIEW E, 2021, 卷号: 104, 期号: 1, 页码: 14408
Authors:  Li, Qiu-Shi;  Shu, Yao-Gen;  Ou-Yang, Zhong-Can;  Li, Ming
Favorite  |  View/Download:64/0  |  Submit date:2021/09/27
NUCLEOTIDE INCORPORATION  CONFORMATIONAL-CHANGES  SPONTANEOUS MUTATION  TRANSLOCATION STEP  MECHANISM  REPLICATION  EXONUCLEASE  SELECTION  DYNAMICS  BINDING  
Percolation Phase Transition from Ionic Liquids to Ionic Liquid Crystals 期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 13169
Authors:  Li, Shen;  Wang, Yanting
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NANOSTRUCTURAL ORGANIZATION  SPATIAL HETEROGENEITY  DYNAMICS  
Phase Behaviors of Ionic Liquids Heating from Different Crystal Polymorphs toward the Same Smectic-A Ionic Liquid Crystal by Molecular Dynamics Simulation 期刊论文
CRYSTALS, 2019, 卷号: 9, 期号: 1, 页码: 26
Authors:  Cao, WD;  Wang, YT
Adobe PDF(4363Kb)  |  Favorite  |  View/Download:204/1  |  Submit date:2019/07/19
SPATIAL HETEROGENEITY  ATOMIC CHARGES  CHAIN-LENGTH  TRANSITION  INSIGHTS  DIFFUSION  STATE  
Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder 期刊论文
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2018, 卷号: 36, 期号: 9, 页码: 2331-2341
Authors:  Faraggi, E;  Dunker, AK;  Sussman, JL;  Kloczkowski, A
Adobe PDF(703Kb)  |  Favorite  |  View/Download:175/0  |  Submit date:2018/12/27
BACKBONE TORSION ANGLES  MAJOR URINARY PROTEIN  INTRINSIC DISORDER  STRUCTURE PREDICTION  SECONDARY STRUCTURE  CRYSTAL-STRUCTURE  DYNAMICS  DIFFRACTION  CRYSTALLOGRAPHY  RECOGNITION  
Protection-against-water-attack determined difference between strengths of backbone hydrogen bonds in kinesin's neck zipper region 期刊论文
CHINESE PHYSICS B, 2018, 卷号: 27, 期号: 2, 页码: 28704
Authors:  Qin, JY;  Geng, YZ;  Lu, G;  Ji, Q;  Fang, HP
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MOLECULAR-DYNAMICS  MOTOR  PROTEINS  LINKER  BINDING  DOMAIN  FORCE  
Reoptimized UNRES Potential for Protein Model Quality Assessment 期刊论文
GENES, 2018, 卷号: 9, 期号: 12, 页码: 601
Authors:  Faraggi, E;  Krupa, P;  Mozolewska, MA;  Liwo, A;  Kloczkowski, A
Adobe PDF(1129Kb)  |  Favorite  |  View/Download:154/0  |  Submit date:2019/07/19
RESIDUE FORCE-FIELD  KNOWLEDGE-BASED POTENTIALS  ACCESSIBLE SURFACE-AREA  STRUCTURE PREDICTION  MOLECULAR-DYNAMICS  STATISTICAL POTENTIALS  STRUCTURE SIMULATIONS  POLYPEPTIDE-CHAINS  SCORING FUNCTION  WEB SERVER  
Protection-against-water-attack determined difference between strengths of backbone hydrogen bonds in kinesin's neck zipper region 期刊论文
CHINESE PHYSICS B, 2018, 卷号: 27, 期号: 2, 页码: 28704
Authors:  Qin, JY;  Geng, YZ;  Lu, G;  Ji, Q;  Fang, HP
Adobe PDF(4707Kb)  |  Favorite  |  View/Download:142/0  |  Submit date:2019/07/19
MOLECULAR-DYNAMICS  MOTOR  PROTEINS  LINKER  BINDING  DOMAIN  FORCE  
Advances in the study of the mechanochemical coupling of kinesin 期刊论文
INTERNATIONAL JOURNAL OF MODERN PHYSICS B, 2018, 卷号: 32, 期号: 18, 页码: 1840001
Authors:  Li, M;  Ou-Yang, ZC;  Shu, YG
Adobe PDF(1300Kb)  |  Favorite  |  View/Download:198/0  |  Submit date:2018/12/27
SQUID GIANT-AXON  BOVINE BRAIN KINESIN  HAND-OVER-HAND  CRYSTAL-STRUCTURE  MOTOR DOMAIN  NECK LINKER  8-NM STEP  MOLECULAR MOTORS  OPTICAL-TRAP  FORCE  
Metastable State during Melting and Solid-Solid Phase Transition of [C&ITn&ITMim][NO3] (&ITn&IT=4-12) Ionic Liquids by Molecular Dynamics Simulation 期刊论文
JOURNAL OF PHYSICAL CHEMISTRY B, 2018, 卷号: 122, 期号: 1, 页码: 229-239
Authors:  Cao, WD;  Wang, YT;  Saielli, G
Adobe PDF(3802Kb)  |  Favorite  |  View/Download:238/0  |  Submit date:2018/12/27
HEXAFLUOROPHOSPHATE SALTS  CHAIN-LENGTH  FORCE-FIELD  CRYSTALS  BEHAVIOR  DIFFUSION  INSIGHTS  SYSTEMS  
Anchor Effect of Interactions Between Kinesin's Nucleotide-Binding Pocket and Microtubule 期刊论文
CELLULAR AND MOLECULAR BIOENGINEERING, 2017, 卷号: 10, 期号: 2, 页码: 162-173
Authors:  Jin, YM;  Geng, YZ;  Lu, LN;  Ma, YL;  Lu, G;  Zhang, H;  Ji, Q;  Geng, YZ (reprint author), Hebei Univ Technol, Sch Sci, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
Adobe PDF(5968Kb)  |  Favorite  |  View/Download:225/4  |  Submit date:2017/12/21
Kinesin  Microtubule  Nucleotide-binding Pocket  Anchor Effect