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Knowledge Management System of Institute of Theoretical Physics, CAS
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SCI期刊论文 [8]
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A Biomarker Characterizing Neurodevelopment with applications in Autism
期刊论文
SCIENTIFIC REPORTS, 2018, 卷号: 8, 页码: 614
Authors:
Wu, D
;
Jose, JV
;
Nurnberger, JI
;
Torres, EB
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Submit date:2018/12/27
SPECTRUM DISORDERS
COMPUTATIONAL PSYCHIATRY
ARM MOVEMENTS
CHILDREN
NEUROSCIENCE
PHENOTYPE
BEHAVIOR
RISK
Reoptimized UNRES Potential for Protein Model Quality Assessment
期刊论文
GENES, 2018, 卷号: 9, 期号: 12, 页码: 601
Authors:
Faraggi, E
;
Krupa, P
;
Mozolewska, MA
;
Liwo, A
;
Kloczkowski, A
Adobe PDF(1129Kb)
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Submit date:2019/07/19
RESIDUE FORCE-FIELD
KNOWLEDGE-BASED POTENTIALS
ACCESSIBLE SURFACE-AREA
STRUCTURE PREDICTION
MOLECULAR-DYNAMICS
STATISTICAL POTENTIALS
STRUCTURE SIMULATIONS
POLYPEPTIDE-CHAINS
SCORING FUNCTION
WEB SERVER
基因组时代的计算微生物学
期刊论文
中国科学:生命科学, 2017, 卷号: 47, 期号: 02, 页码: 159-170
Authors:
左光宏
;
郝柏林
Adobe PDF(1524Kb)
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View/Download:217/0
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Submit date:2019/09/06
原核生物
亲缘树
分类系统
不用序列联配的基因组比较
Cvtree
Lvtree
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:
Skwark, MJ
;
Croucher, NJ
;
Puranen, S
;
Chewapreecha, C
;
Pesonen, M
;
Xu, YY
;
Turner, P
;
Harris, SR
;
Beres, SB
;
Musser, JM
;
Parkhill, J
;
Bentley, SD
;
Aurell, E
;
Corander, J
;
Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.
;
Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.
;
Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.
;
Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.
;
Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.
;
Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.
;
Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Submit date:2017/12/21
Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)
期刊论文
BMC GENOMICS, 2015, 卷号: 16, 期号: 0, 页码: S8
Authors:
Handelman, SK
;
Seweryn, M
;
Smith, RM
;
Hartmann, K
;
Wang, DX
;
Pietrzak, M
;
Johnson, AD
;
Kloczkowski, A
;
Sadee, W
;
Handelman, SK (reprint author), Ohio State Univ, Coll Med, Ctr Pharmacogen, Graves Hall,330 W 10th Ave, Columbus, OH 43210 USA.
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Submit date:2016/11/21
Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation
期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 365, 期号: 0, 页码: 377-389
Authors:
Li, R
;
Xu, LF
;
Shi, HL
;
Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2016/11/21
Polar Effect
The Two-state Promoter
Transcription Terminator
Gene Expression Correlation
Operon Structure
Accurate single-sequence prediction of solvent accessible surface area using local and global features
期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2014, 卷号: 82, 期号: 11, 页码: 3170-3176
Authors:
Faraggi, E
;
Zhou, YQ
;
Kloczkowski, A
;
Faraggi, E (reprint author), Indiana Univ Sch Med, Dept Biochem & Mol Biol, Indianapolis, IN 46202 USA.
Adobe PDF(606Kb)
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Submit date:2015/06/03
Protein Secondary Structure
Backbone Torsion Angles
Real-value Prediction
Regression
原核生物系统发生学与分类学的一致性:组份矢量树与原核生物分类系统的详尽比较
期刊论文
中国科学(C辑:生命科学), 2007, 期号: 04, 页码: 389-401
Authors:
高雷
;
戚继
;
孙健冬
;
郝柏林
Adobe PDF(763Kb)
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View/Download:154/0
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Submit date:2019/09/06
组分矢量方法
伯杰分类
原核生物亲缘树
原核生物分类
系统发生
CVTree
16S rRNA
Origin and phylogeny of chloroplasts revealed by a simple correlation analysis of complete genomes
期刊论文
MOLECULAR BIOLOGY AND EVOLUTION, 2004, 卷号: 21, 期号: 1, 页码: 200-206
Authors:
Chu, KH
;
Qi, J
;
Yu, ZG
;
Anh, V
;
Chu, KH , Chinese Univ Hong Kong, Dept Biol, Shatin, Hong Kong, Peoples R China.
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Submit date:2012/08/30
Mitochondrial Genome
Protein Sequences
Plastid Genome
Nucleotide-sequence
Gene-transfer
Red Algae
Evolution
Information
Nucleus
Trees
A draft sequence of the rice genome (Oryza sativa L. ssp indica)
期刊论文
SCIENCE, 2002, 卷号: 296, 期号: 5565, 页码: 79-92
Authors:
Yu, J
;
Hu, SN
;
Wang, J
;
Wong, GKS
;
Li, SG
;
Liu, B
;
Deng, YJ
;
Dai, L
;
Zhou, Y
;
Zhang, XQ
;
Cao, ML
;
Liu, J
;
Sun, JD
;
Tang, JB
;
Chen, YJ
;
Huang, XB
;
Lin, W
;
Ye, C
;
Tong, W
;
Cong, LJ
;
Geng, JN
;
Han, YJ
;
Li, L
;
Li, W
;
Hu, GQ
;
Huang, XG
;
Li, WJ
;
Li, J
;
Liu, ZW
;
Liu, JP
;
Qi, QH
;
Liu, JS
;
Li, T
;
Wang, XG
;
Lu, H
;
Wu, TT
;
Zhu, M
;
Ni, PX
;
Han, H
;
Dong, W
;
Ren, XY
;
Feng, XL
;
Cui, P
;
Li, XR
;
Wang, H
;
Xu, X
;
Zhai, WX
;
Xu, Z
;
Zhang, JS
;
He, SJ
;
Zhang, JG
;
Xu, JC
;
Zhang, KL
;
Zheng, XW
;
Dong, JH
;
Zeng, WY
;
Tao, L
;
Ye, J
;
Tan, J
;
Ren, XD
;
Chen, XW
;
He, J
;
Liu, DF
;
Tian, W
;
Tian, CG
;
Xia, HG
;
Bao, QY
;
Li, G
;
Gao, H
;
Cao, T
;
Zhao, WM
;
Li, P
;
Chen, W
;
Wang, XD
;
Zhang, Y
;
Hu, JF
;
Liu, S
;
Yang, J
;
Zhang, GY
;
Xiong, YQ
;
Li, ZJ
;
Mao, L
;
Zhou, CS
;
Zhu, Z
;
Chen, RS
;
Hao, BL
;
Zheng, WM
;
Chen, SY
;
Guo, W
;
Li, GJ
;
Liu, SQ
;
Tao, M
;
Zhu, LH
;
Yuan, LP
;
Yang, HM
;
Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China.
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Submit date:2012/08/29
Transposable Elements
Arabidopsis-thaliana
Human Genes
Comparative Genetics
Biallelic Markers
Grass Genomes
Cpg Islands
Dna
Plants
Identification