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Efficiency of collective myosin II motors studied with an elastic coupling power-stroke ratchet model 期刊论文
CHINESE PHYSICS B, 2018, 卷号: 27, 期号: 12, 页码: 128701
Authors:  Wang, ZQ;  Li, JF;  Xia, YG;  Wang, GD;  Shu, YG
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MECHANICAL EFFICIENCY  MUSCLE-CONTRACTION  WORKING STROKE  FORCE  MOLECULES  STIFFNESS  FIBERS  
Advances in the study of the mechanochemical coupling of kinesin 期刊论文
INTERNATIONAL JOURNAL OF MODERN PHYSICS B, 2018, 卷号: 32, 期号: 18, 页码: 1840001
Authors:  Li, M;  Ou-Yang, ZC;  Shu, YG
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SQUID GIANT-AXON  BOVINE BRAIN KINESIN  HAND-OVER-HAND  CRYSTAL-STRUCTURE  MOTOR DOMAIN  NECK LINKER  8-NM STEP  MOLECULAR MOTORS  OPTICAL-TRAP  FORCE  
Anchor Effect of Interactions Between Kinesin's Nucleotide-Binding Pocket and Microtubule 期刊论文
CELLULAR AND MOLECULAR BIOENGINEERING, 2017, 卷号: 10, 期号: 2, 页码: 162-173
Authors:  Jin, YM;  Geng, YZ;  Lu, LN;  Ma, YL;  Lu, G;  Zhang, H;  Ji, Q;  Geng, YZ (reprint author), Hebei Univ Technol, Sch Sci, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Kinesin  Microtubule  Nucleotide-binding Pocket  Anchor Effect  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Mechanism of pyrophosphate ion release in T7 RNA polymerase revealed by free energy simulations 期刊论文
COMPUTATIONAL AND THEORETICAL CHEMISTRY, 2016, 卷号: 1094, 页码: 127-132
Authors:  Wu, SG;  Jiang, MQ;  Liu, L;  Wu, SG (reprint author), Sichuan Normal Univ, Coll Chem & Mat Sci, Chengdu 610068, Peoples R China.
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Molecular Dynamics Simulation  T7 Rna Polymerase  Ppi Release  Potential Of Mean Force  
Energy-efficient population coding constrains network size of a neuronal array system 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 19369
Authors:  Yu, LC;  Zhang, C;  Liu, LW;  Yu, YG;  Yu, YG (reprint author), Fudan Univ, Ctr Computat Syst Biol, Collaborat Innovat Ctr Brain Sci, Sch Life Sci, Shanghai 200433, Peoples R China.
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F-1-ATPase Stabilizes and Positions Adenosine Triphosphate Revealed by Molecular Dynamics Simulations 期刊论文
ACTA PHYSICO-CHIMICA SINICA, 2015, 卷号: 31, 期号: 9, 页码: 1803-1809
Authors:  Wu, SG;  Gao, XT;  Li, Q;  Liao, J;  Xu, CG;  Wu, SG (reprint author), Sichuan Normal Univ, Coll Chem & Mat Sci, Chengdu 610068, Peoples R China.
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F-1-atpase  Hydrogen Bond  Molecular Dynamics  Mutation  
F0F1-ATPase STATOR REGULATION STUDIED WITH A RESONANCE MODEL 会议论文
BIODEVICES: PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON BIOMEDICAL ELECTRONICS AND DEVICES, PORTUGAL, FEB 01-04, 2012
Authors:  Shu, YG;  Ou-Yang, ZC
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ATP SYNTHESIS  PROTON TRANSPORT  F-1-ATPASE  SYNTHASE  ROTATION  DRIVEN  MECHANISM  KINETICS  
F0F1-ATPase STATOR REGULATION STUDIED WITH A RESONANCE MODEL 期刊论文
BIODEVICES: PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON BIOMEDICAL ELECTRONICS AND DEVICES, 2012, 页码: 132-137
Authors:  Shu, YG;  Ou-Yang, ZC;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Atp Synthase  Molecular Machine  Proton Transport  F-1-atpase  Rotation  Driven  Mechanism  Kinetics  Motors  
F(0)F(1)-ATPase activity regulated by external links on beta subunits 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2010, 卷号: 391, 期号: 1, 页码: 182-186
Authors:  Cheng, Jie;  Zhang, Xiao-ai;  Shu, Yao-Gen;  Yue, Jia-Chang;  Shu, YG , Chinese Acad Sci, Inst Theoret Phys, Key Lab Frontiers Theoret Phys, Beijing 100190, Peoples R China
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Atp Synthase  Rhodospirillum-rubrum  Quantum Dots  Proton Flux  F-1-atpase  Driven  Purification  Transport  F1-atpase  Rotation