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SCI期刊论文 [10]
SCI会议论文 [2]
CNKI期刊论文 [1]
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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition
期刊论文
MSYSTEMS, 2020, 卷号: 5, 期号: 5, 页码: e00575-20
Authors:
Zhang, Qing
;
Brambilla, Elisa
;
Li, Rui
;
Shi, Hualin
;
Lagomarsino, Marco Cosentino
;
Sclavi, Bianca
Adobe PDF(698Kb)
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Submit date:2020/11/26
RNA-POLYMERASE AVAILABILITY
ESCHERICHIA-COLI
RIBOSOMAL-RNA
GENE-EXPRESSION
PPGPP
EFFICIENCY
PROMOTERS
SUBUNITS
(P)PPGPP
REVEALS
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
会议论文
BMC BIOINFORMATICS, Wuhan, PEOPLES R CHINA, JAN 14-16, 2019
Authors:
Wang, C
;
Wei, Y
;
Zhang, HC
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
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Submit date:2019/07/24
TERTIARY STRUCTURES
FRAGMENTS
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 135
Authors:
Wang, C
;
Wei, Y
;
Zhang, HC
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
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Submit date:2019/07/19
TERTIARY STRUCTURES
FRAGMENTS
Reoptimized UNRES Potential for Protein Model Quality Assessment
期刊论文
GENES, 2018, 卷号: 9, 期号: 12, 页码: 601
Authors:
Faraggi, E
;
Krupa, P
;
Mozolewska, MA
;
Liwo, A
;
Kloczkowski, A
Adobe PDF(1129Kb)
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Submit date:2019/07/19
RESIDUE FORCE-FIELD
KNOWLEDGE-BASED POTENTIALS
ACCESSIBLE SURFACE-AREA
STRUCTURE PREDICTION
MOLECULAR-DYNAMICS
STATISTICAL POTENTIALS
STRUCTURE SIMULATIONS
POLYPEPTIDE-CHAINS
SCORING FUNCTION
WEB SERVER
蛋白质三级结构预测算法综述
期刊论文
计算机学报, 2018, 卷号: 41, 期号: 04, 页码: 760-779
Authors:
王超
;
朱建伟
;
张海仓
;
巩海娥
;
郑伟谋
;
卜东波
Adobe PDF(930Kb)
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Submit date:2019/09/05
蛋白质结构
同源建模
归范法
从头预测法
能量函数
动态规划
线性规划
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
Authors:
Zhu, JW
;
Zhang, HC
;
Li, SC
;
Wang, C
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
;
Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing 100190, Peoples R China.
;
Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2017/12/21
NeBcon: protein contact map prediction using neural network training coupled with naiive Bayes classifiers
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 15, 页码: 2296-2306
Authors:
He, BJ
;
Mortuza, SM
;
Wang, YT
;
Shen, HB
;
Zhang, Y
;
Zhang, Y (reprint author), Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA.
;
Zhang, Y (reprint author), Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA.
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Submit date:2017/12/21
MQAPsingle: A quasi single-model approach for estimation of the quality of individual protein structure models
期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2016, 卷号: 84, 期号: 8, 页码: 1021-1028
Authors:
Pawlowski, M
;
Kozlowski, L
;
Kloczkowski, A
;
Kloczkowski, A (reprint author), Nationwide Childrens Hosp, Res Inst, Battelle Ctr Math Med, 700 Childrens Dr, Columbus, OH 43205 USA.
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Submit date:2017/10/13
Model Quality Assessment
Protein Structure
Protein Prediction
Mqap
Single-model Mqap
Model Correctness
Casp10
FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition
期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 3, 页码: 462-464
Authors:
Wang, C
;
Zhang, HC
;
Zheng, WM
;
Xu, D
;
Zhu, JW
;
Wang, B
;
Ning, K
;
Sun, SW
;
Li, SC
;
Bu, DB
;
Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing, Peoples R China.
;
Li, SC (reprint author), City Univ Hong Kong, Dept Comp Sci, Kowloon, Hong Kong, Peoples R China.
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Submit date:2017/10/13
Accurate disulfide-bonding network predictions improve ab initio structure prediction of cysteine-rich proteins
期刊论文
BIOINFORMATICS, 2015, 卷号: 31, 期号: 23, 页码: 3773-3781
Authors:
Yang, J
;
He, BJ
;
Jang, R
;
Zhang, Y
;
Shen, HB
;
Zhang, Y (reprint author), Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA.
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Submit date:2016/11/21