ITP OpenIR

Browse/Search Results:  1-10 of 14 Help

Selected(0)Clear Items/Page:    Sort:
DCA for genome-wide epistasis analysis: the statistical genetics perspective 期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:  Gao, CY;  Cecconi, F;  Vulpiani, A;  Zhou, HJ;  Aurell, E
Adobe PDF(1652Kb)  |  Favorite  |  View/Download:49/0  |  Submit date:2019/07/19
DIRECT-COUPLING ANALYSIS  PROTEIN-STRUCTURE  CONTACTS  HIV  IDENTIFICATION  RECOMBINATION  LINKAGE  LANDSCAPE  INFERENCE  MODEL  
基因组时代的计算微生物学 期刊论文
中国科学:生命科学, 2017, 卷号: 47, 期号: 02, 页码: 159-170
Authors:  左光宏;  郝柏林
Adobe PDF(1524Kb)  |  Favorite  |  View/Download:33/0  |  Submit date:2019/09/06
原核生物  亲缘树  分类系统  不用序列联配的基因组比较  Cvtree  Lvtree  
Proofreading of DNA polymerase: a new kinetic model with higher-order terminal effects 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2017, 卷号: 29, 期号: 2, 页码: 25101
Authors:  Song, YS;  Shu, YG;  Zhou, X;  Ou-Yang, ZC;  Li, M;  Li, M (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China.
Adobe PDF(2168Kb)  |  Favorite  |  View/Download:67/0  |  Submit date:2017/12/21
Dna Polymerase  Proofreading  Kinetics  Fidelity  Higher-order Terminal Effects  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
Adobe PDF(3698Kb)  |  Favorite  |  View/Download:69/0  |  Submit date:2017/12/21
Effects of cooperation between translating ribosome and RNA polymerase on termination efficiency of the Rho-independent terminator 期刊论文
NUCLEIC ACIDS RESEARCH, 2016, 卷号: 44, 期号: 6, 页码: 2554-2563
Authors:  Li, R;  Zhang, Q;  Li, JB;  Shi, HL;  Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.;  Li, JB (reprint author), Chinese Acad Sci, Inst Chem, Beijing 100190, Peoples R China.;  Li, JB (reprint author), Natl Ctr Nanosci & Technol, Beijing 100190, Peoples R China.
Adobe PDF(1861Kb)  |  Favorite  |  View/Download:63/2  |  Submit date:2017/10/13
The bulk and the tail of minimal absent words in genome sequences 期刊论文
PHYSICAL BIOLOGY, 2016, 卷号: 13, 期号: 2, 页码: 26004
Authors:  Aurell, E;  Innocenti, N;  Zhou, HJ;  Innocenti, N (reprint author), Hebrew Univ Jerusalem, Sch Comp Sci & Engn, IL-91904 Jerusalem, Israel.
Adobe PDF(1879Kb)  |  Favorite  |  View/Download:50/1  |  Submit date:2017/10/13
Minimal Absent Words  Copy-mutation Evolution Model  Random Sequence  
Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs) 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 期号: 0, 页码: S8
Authors:  Handelman, SK;  Seweryn, M;  Smith, RM;  Hartmann, K;  Wang, DX;  Pietrzak, M;  Johnson, AD;  Kloczkowski, A;  Sadee, W;  Handelman, SK (reprint author), Ohio State Univ, Coll Med, Ctr Pharmacogen, Graves Hall,330 W 10th Ave, Columbus, OH 43210 USA.
Adobe PDF(872Kb)  |  Favorite  |  View/Download:56/8  |  Submit date:2016/11/21
Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 365, 期号: 0, 页码: 377-389
Authors:  Li, R;  Xu, LF;  Shi, HL;  Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
Adobe PDF(1361Kb)  |  Favorite  |  View/Download:82/6  |  Submit date:2016/11/21
Polar Effect  The Two-state Promoter  Transcription Terminator  Gene Expression Correlation  Operon Structure  
Knowledge-based potentials in bioinformatics: From a physicist's viewpoint 期刊论文
CHINESE PHYSICS B, 2015, 卷号: 24, 期号: 12, 页码: 128701
Authors:  Zheng, WM;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
Adobe PDF(262Kb)  |  Favorite  |  View/Download:40/5  |  Submit date:2016/11/21
Knowledge-based Potentials For Proteins  Protein Native Structures  Sequence Signals  
Self-organizing approach for meta-genomes 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2014, 卷号: 53, 期号: Part A, 页码: 118-124
Authors:  Zhu, JF;  Zheng, WM;  Zheng, WM (reprint author), Acad Sinica, Inst Theoret Phys, Beijing 100190, Peoples R China.
Adobe PDF(725Kb)  |  Favorite  |  View/Download:66/7  |  Submit date:2015/06/03
Protein-coding Regions  Microbial Genomes  Dna  Sequences  Diversity  Obesity  Flora