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Improving prediction of burial state of residues by exploiting correlation among residues 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 70
Authors:  Gong, HE;  Zhang, HC;  Zhu, JW;  Wang, C;  Sun, SW;  Zheng, WM;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Proc, Beijing 100190, Peoples R China.;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Protein Structure  Burial States Of Residue  Conditional Random Field  Residue Correlation  
Spin-polarized transport in helical membranes due to spin-orbit coupling 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2017, 卷号: 29, 期号: 13, 页码: 135801
Authors:  Liang, GH;  Wang, YL;  Jiang, H;  Lai, MY;  Zong, HS;  Zong, HS (reprint author), Nanjing Univ, Dept Phys, Nanjing 210093, Jiangsu, Peoples R China.;  Zong, HS (reprint author), Joint Ctr Particle Nucl Phys & Cosmol, Nanjing 210093, Jiangsu, Peoples R China.;  Zong, HS (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Spin-dependent Transmission  Helical Membrane  Spin Current  
Proofreading of DNA polymerase: a new kinetic model with higher-order terminal effects 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2017, 卷号: 29, 期号: 2, 页码: 25101
Authors:  Song, YS;  Shu, YG;  Zhou, X;  Ou-Yang, ZC;  Li, M;  Li, M (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China.
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Dna Polymerase  Proofreading  Kinetics  Fidelity  Higher-order Terminal Effects  
Designing a Double-Pole Nanoscale Relay Based on a Carbon Nanotube: A Theoretical Study 期刊论文
PHYSICAL REVIEW APPLIED, 2017, 卷号: 8, 期号: 2, 页码: 24006
Authors:  Mu, WH;  Ou-Yang, ZC;  Dresselhaus, MS;  Mu, WH (reprint author), Wenzhou Med Univ, Sch Biomed Engn, Eye Hosp, Sch Ophthalmol & Optometry, Wenzhou 325027, Peoples R China.;  Mu, WH (reprint author), Chinese Acad Sci, CNITECH, Wenzhou Inst Biomat & Engn, Wenzhou 325001, Peoples R China.
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Spike Pattern Structure Influences Synaptic Efficacy Variability under STDP and Synaptic Homeostasis. II: Spike Shuffling Methods on LIF Networks 期刊论文
FRONTIERS IN COMPUTATIONAL NEUROSCIENCE, 2016, 卷号: 10, 页码: 83
Authors:  Bi, ZD;  Zhou, CS;  Bi, ZD (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing, Peoples R China.;  Zhou, CS (reprint author), Hong Kong Baptist Univ, Dept Phys, Kowloon Tong, Hong Kong, Peoples R China.;  Zhou, CS (reprint author), Hong Kong Baptist Univ, Beijing Hong Kong Singapore Joint Ctr Nonlinear &, Ctr Nonlinear Studies, Inst Computat & Theoret Studies, Kowloon Tong, Hong Kong, Peoples R China.;  Zhou, CS (reprint author), Beijing Computat Sci Res Ctr, Beijing, Peoples R China.;  Zhou, CS (reprint author), Hong Kong Baptist Univ, Res Ctr, Inst Res & Continuing Educ, Shenzhen, Peoples R China.
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Spike Pattern Structure  Synaptic Plasticity  Efficacy Variability  Stdp  Synaptic Homeostasis  Spike Shuffling Methods  
The bulk and the tail of minimal absent words in genome sequences 期刊论文
PHYSICAL BIOLOGY, 2016, 卷号: 13, 期号: 2, 页码: 26004
Authors:  Aurell, E;  Innocenti, N;  Zhou, HJ;  Innocenti, N (reprint author), Hebrew Univ Jerusalem, Sch Comp Sci & Engn, IL-91904 Jerusalem, Israel.
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Minimal Absent Words  Copy-mutation Evolution Model  Random Sequence  
Different nanostructures caused by competition of intra- and inter-beta-sheet interactions in hierarchical self-assembly of short peptides 期刊论文
JOURNAL OF COLLOID AND INTERFACE SCIENCE, 2016, 卷号: 464, 页码: 219-228
Authors:  Zhou, P;  Deng, L;  Wang, YT;  Lu, JR;  Xu, H;  Wang, YT (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, 55 East Zhongguancun Road,POB 2735, Beijing 100190, Peoples R China.
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Short Peptides  Self-assembly  Nanostructures  Intermolecular Interactions  Molecular Packing Modes  Molecular Dynamics  
SNSMIL, a real-time single molecule identification and localization algorithm for super-resolution fluorescence microscopy 期刊论文
SCIENTIFIC REPORTS, 2015, 卷号: 5, 期号: 0, 页码: 11073
Authors:  Tang, YQ;  Dai, LR;  Zhang, XM;  Li, JB;  Hendriks, JN;  Fan, XM;  Gruteser, N;  Meisenberg, A;  Baumann, A;  Katranidis, A;  Gensch, T;  Li, JB (reprint author), Natl Ctr Nanosci & Technol China, 11 Beiyitiao Zhongguancun, Beijing 100190, Peoples R China.
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Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 365, 期号: 0, 页码: 377-389
Authors:  Li, R;  Xu, LF;  Shi, HL;  Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Polar Effect  The Two-state Promoter  Transcription Terminator  Gene Expression Correlation  Operon Structure  
A general theory of kinetics and thermodynamics of steady-state copolymerization 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2015, 卷号: 27, 期号: 23, 页码: 235105
Authors:  Shu, YG;  Song, YS;  Ou-Yang, ZC;  Li, M;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Zhong Guan Cun East St 55,POB 2735, Beijing 100190, Peoples R China.
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Steady-state Copolymerization  Depropagation  Higher-order Terminal Model  Kinetics  Thermodynamics