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Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Behavioural effect of low-dose BPA on male zebrafish: Tuning of male mating competition and female mating preference during courtship process 期刊论文
CHEMOSPHERE, 2017, 卷号: 169, 页码: 40-52
Authors:  Li, X;  Guo, JY;  Zhou, HJ;  Zhang, SH;  Liu, XD;  Chen, DY;  Fang, YC;  Feng, XZ;  Feng, XZ (reprint author), Nankai Univ, Coll Life Sci, State Key Lab Med Chem Biol, Key Lab Bioact Mat,Minist Educ, Tianjin 300071, Peoples R China.;  Fang, YC (reprint author), Nankai Univ, Tianjin Key Lab Intelligent Robot, Inst Robot & Automat Informat Syst, Tianjin 300071, Peoples R China.;  Chen, DY (reprint author), Nankai Univ, Tianjin Key Lab Tumor Microenvironm & Neurovasc R, Sch Med, Dept Histol & Embryol, Tianjin 300071, Peoples R China.
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Low-dose Bisphenol a  Zebrafish  Courtship  Behavior  
The bulk and the tail of minimal absent words in genome sequences 期刊论文
PHYSICAL BIOLOGY, 2016, 卷号: 13, 期号: 2, 页码: 26004
Authors:  Aurell, E;  Innocenti, N;  Zhou, HJ;  Innocenti, N (reprint author), Hebrew Univ Jerusalem, Sch Comp Sci & Engn, IL-91904 Jerusalem, Israel.
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Minimal Absent Words  Copy-mutation Evolution Model  Random Sequence  
Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs) 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 期号: 0, 页码: S8
Authors:  Handelman, SK;  Seweryn, M;  Smith, RM;  Hartmann, K;  Wang, DX;  Pietrzak, M;  Johnson, AD;  Kloczkowski, A;  Sadee, W;  Handelman, SK (reprint author), Ohio State Univ, Coll Med, Ctr Pharmacogen, Graves Hall,330 W 10th Ave, Columbus, OH 43210 USA.
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Self-organizing approach for meta-genomes 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2014, 卷号: 53, 期号: Part A, 页码: 118-124
Authors:  Zhu, JF;  Zheng, WM;  Zheng, WM (reprint author), Acad Sinica, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Protein-coding Regions  Microbial Genomes  Dna  Sequences  Diversity  Obesity  Flora  
Mechano-chemical selections of two competitive unfolding pathways of a single DNA i-motif 期刊论文
CHINESE PHYSICS B, 2014, 卷号: 23, 期号: 6, 页码: 68702
Authors:  Xu, Y;  Chen, H;  Qu, YJ;  Efremov, AK;  Li, M;  Ouyang, ZC;  Liu, DS;  Yan, J;  Liu, DS (reprint author), Tsinghua Univ, Minist Educ, Dept Chem, Key Lab Organ Optoelect & Mol Engn, Beijing 100084, Peoples R China.
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G-quadruplex  Mechanical Stability  Rna-polymerase  Stranded-dna  Double Helix  B-dna  Molecule  Force  Proteins  Dynamics  
TreeFam: a curated database of phylogenetic trees of animal gene families 期刊论文
NUCLEIC ACIDS RESEARCH, 2006, 卷号: 34, 期号: 34, 页码: D572-D580
Authors:  Li, Heng;  Coghlan, Avril;  Ruan, Jue;  Coin, Lachlan James;  Heriche, Jean-Karim;  Osmotherly, Lara;  Li, Ruiqiang;  Liu, Tao;  Zhang, Zhang;  Bolund, Lars;  Wong, Gane Ka-Shu;  Zheng, Weimou;  Dehal, Paramvir;  Wang, Jun;  Durbin, Richard;  Durbin, R , Wellcome Trust Sanger Inst, Wellcome Trust Genome Campus, Cambridge CB10 1SA, England
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Protein Families  Multigene Family  Genome  Orthologs  Phylogenomics  Paralogs  Duplication  Vertebrate  Resources  Evolution  
A draft sequence of the rice genome (Oryza sativa L. ssp indica) 期刊论文
SCIENCE, 2002, 卷号: 296, 期号: 5565, 页码: 79-92
Authors:  Yu, J;  Hu, SN;  Wang, J;  Wong, GKS;  Li, SG;  Liu, B;  Deng, YJ;  Dai, L;  Zhou, Y;  Zhang, XQ;  Cao, ML;  Liu, J;  Sun, JD;  Tang, JB;  Chen, YJ;  Huang, XB;  Lin, W;  Ye, C;  Tong, W;  Cong, LJ;  Geng, JN;  Han, YJ;  Li, L;  Li, W;  Hu, GQ;  Huang, XG;  Li, WJ;  Li, J;  Liu, ZW;  Liu, JP;  Qi, QH;  Liu, JS;  Li, T;  Wang, XG;  Lu, H;  Wu, TT;  Zhu, M;  Ni, PX;  Han, H;  Dong, W;  Ren, XY;  Feng, XL;  Cui, P;  Li, XR;  Wang, H;  Xu, X;  Zhai, WX;  Xu, Z;  Zhang, JS;  He, SJ;  Zhang, JG;  Xu, JC;  Zhang, KL;  Zheng, XW;  Dong, JH;  Zeng, WY;  Tao, L;  Ye, J;  Tan, J;  Ren, XD;  Chen, XW;  He, J;  Liu, DF;  Tian, W;  Tian, CG;  Xia, HG;  Bao, QY;  Li, G;  Gao, H;  Cao, T;  Zhao, WM;  Li, P;  Chen, W;  Wang, XD;  Zhang, Y;  Hu, JF;  Liu, S;  Yang, J;  Zhang, GY;  Xiong, YQ;  Li, ZJ;  Mao, L;  Zhou, CS;  Zhu, Z;  Chen, RS;  Hao, BL;  Zheng, WM;  Chen, SY;  Guo, W;  Li, GJ;  Liu, SQ;  Tao, M;  Zhu, LH;  Yuan, LP;  Yang, HM;  Yuan, LP , Chinese Acad Sci, Inst Genet, Beijing 100101, Peoples R China.
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Transposable Elements  Arabidopsis-thaliana  Human Genes  Comparative Genetics  Biallelic Markers  Grass Genomes  Cpg Islands  Dna  Plants  Identification  
Statistically significant strings are related to regulatory elements in the promoter regions of Saccharomyces cerevisiae 期刊论文
PHYSICA A, 2001, 卷号: 290, 期号: 40972, 页码: 464-474
Authors:  Hu, R;  Wang, B;  Hu, R , Acad Sinica, Inst Theoret Phys, POB 2735, Beijing 10080, Peoples R China.
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Dna-sequences  Nucleotide-sequences  Genome  Genes