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Controllability and maximum matchings of complex networks
期刊论文
PHYSICAL REVIEW E, 2019, 卷号: 99, 期号: 1, 页码: 12317
Authors:
Zhao, JH
;
Zhou, HJ
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Submit date:2019/07/19
RANDOM GRAPHS
DYNAMICS
DCA for genome-wide epistasis analysis: the statistical genetics perspective
期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:
Gao, CY
;
Cecconi, F
;
Vulpiani, A
;
Zhou, HJ
;
Aurell, E
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Submit date:2019/07/19
DIRECT-COUPLING ANALYSIS
PROTEIN-STRUCTURE
CONTACTS
HIV
IDENTIFICATION
RECOMBINATION
LINKAGE
LANDSCAPE
INFERENCE
MODEL
Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder
期刊论文
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2018, 卷号: 36, 期号: 9, 页码: 2331-2341
Authors:
Faraggi, E
;
Dunker, AK
;
Sussman, JL
;
Kloczkowski, A
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Submit date:2018/12/27
BACKBONE TORSION ANGLES
MAJOR URINARY PROTEIN
INTRINSIC DISORDER
STRUCTURE PREDICTION
SECONDARY STRUCTURE
CRYSTAL-STRUCTURE
DYNAMICS
DIFFRACTION
CRYSTALLOGRAPHY
RECOGNITION
Correlation-compressed direct-coupling analysis
期刊论文
PHYSICAL REVIEW E, 2018, 卷号: 98, 期号: 3, 页码: 32407
Authors:
Gao, CY
;
Zhou, HJ
;
Aurell, E
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Submit date:2018/12/27
STRUCTURE PREDICTION
PROTEIN-STRUCTURE
CONTACTS
IDENTIFICATION
MODEL
SEQUENCES
FAMILIES
HUMANS
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:
Skwark, MJ
;
Croucher, NJ
;
Puranen, S
;
Chewapreecha, C
;
Pesonen, M
;
Xu, YY
;
Turner, P
;
Harris, SR
;
Beres, SB
;
Musser, JM
;
Parkhill, J
;
Bentley, SD
;
Aurell, E
;
Corander, J
;
Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.
;
Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.
;
Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.
;
Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.
;
Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.
;
Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.
;
Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Submit date:2017/12/21
Behavioural effect of low-dose BPA on male zebrafish: Tuning of male mating competition and female mating preference during courtship process
期刊论文
CHEMOSPHERE, 2017, 卷号: 169, 页码: 40-52
Authors:
Li, X
;
Guo, JY
;
Zhou, HJ
;
Zhang, SH
;
Liu, XD
;
Chen, DY
;
Fang, YC
;
Feng, XZ
;
Feng, XZ (reprint author), Nankai Univ, Coll Life Sci, State Key Lab Med Chem Biol, Key Lab Bioact Mat,Minist Educ, Tianjin 300071, Peoples R China.
;
Fang, YC (reprint author), Nankai Univ, Tianjin Key Lab Intelligent Robot, Inst Robot & Automat Informat Syst, Tianjin 300071, Peoples R China.
;
Chen, DY (reprint author), Nankai Univ, Tianjin Key Lab Tumor Microenvironm & Neurovasc R, Sch Med, Dept Histol & Embryol, Tianjin 300071, Peoples R China.
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Submit date:2017/12/21
Low-dose Bisphenol a
Zebrafish
Courtship
Behavior
The bulk and the tail of minimal absent words in genome sequences
期刊论文
PHYSICAL BIOLOGY, 2016, 卷号: 13, 期号: 2, 页码: 26004
Authors:
Aurell, E
;
Innocenti, N
;
Zhou, HJ
;
Innocenti, N (reprint author), Hebrew Univ Jerusalem, Sch Comp Sci & Engn, IL-91904 Jerusalem, Israel.
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Submit date:2017/10/13
Minimal Absent Words
Copy-mutation Evolution Model
Random Sequence
Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)
期刊论文
BMC GENOMICS, 2015, 卷号: 16, 期号: 0, 页码: S8
Authors:
Handelman, SK
;
Seweryn, M
;
Smith, RM
;
Hartmann, K
;
Wang, DX
;
Pietrzak, M
;
Johnson, AD
;
Kloczkowski, A
;
Sadee, W
;
Handelman, SK (reprint author), Ohio State Univ, Coll Med, Ctr Pharmacogen, Graves Hall,330 W 10th Ave, Columbus, OH 43210 USA.
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Submit date:2016/11/21
Mechano-chemical selections of two competitive unfolding pathways of a single DNA i-motif
期刊论文
CHINESE PHYSICS B, 2014, 卷号: 23, 期号: 6, 页码: 68702
Authors:
Xu, Y
;
Chen, H
;
Qu, YJ
;
Efremov, AK
;
Li, M
;
Ouyang, ZC
;
Liu, DS
;
Yan, J
;
Liu, DS (reprint author), Tsinghua Univ, Minist Educ, Dept Chem, Key Lab Organ Optoelect & Mol Engn, Beijing 100084, Peoples R China.
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Submit date:2015/06/03
G-quadruplex
Mechanical Stability
Rna-polymerase
Stranded-dna
Double Helix
B-dna
Molecule
Force
Proteins
Dynamics
Self-organizing approach for meta-genomes
期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2014, 卷号: 53, 期号: Part A, 页码: 118-124
Authors:
Zhu, JF
;
Zheng, WM
;
Zheng, WM (reprint author), Acad Sinica, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2015/06/03
Protein-coding Regions
Microbial Genomes
Dna
Sequences
Diversity
Obesity
Flora