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Mean-field analysis of two-species totally asymmetric simple exclusion process (TASEP) with attachment and detachment 期刊论文
CANADIAN JOURNAL OF PHYSICS, 2017, 卷号: 95, 期号: 4, 页码: 370-380
Authors:  Song, MH;  Zhang, YX;  Zhang, YX (reprint author), Fudan Univ, Sch Math Sci, Ctr Computat Syst Biol, Shanghai Key Lab Contemporary Appl Math, Shanghai 200433, Peoples R China.;  Zhang, YX (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China, Beijing 10090, Peoples R China.
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Two-species Tasep  Domain Wall  Boundary Layer  Molecular Motor  Phase Transition  
Initiation Mechanism of Kinesin's Neck Linker Docking Process 期刊论文
CHINESE PHYSICS LETTERS, 2017, 卷号: 34, 期号: 2, 页码: 28701
Authors:  Geng, YZ;  Zhang, H;  Lyu, G;  Ji, Q;  Ji, Q (reprint author), Hebei Univ Technol, Inst Biophys, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Hebei Univ Technol, Sch Sci, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Stabilities and Dynamics of Protein Folding Nuclei by Molecular Dynamics Simulation 期刊论文
COMMUNICATIONS IN THEORETICAL PHYSICS, 2017, 卷号: 68, 期号: 1, 页码: 137-148
Authors:  Song, YS;  Zhou, X;  Zheng, WM;  Wang, YT;  Wang, YT (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.;  Wang, YT (reprint author), Chinese Acad Sci, Inst Theoret Phys, Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Protein Folding  Molecular Dynamics Simulation  Structure Prediction  
Tilted Axis Rotation of Mn-57 in Covariant Density Functional Theory 期刊论文
CHINESE PHYSICS LETTERS, 2016, 卷号: 33, 期号: 1, 页码: 12101
Authors:  Peng, J;  Xu, WQ;  Peng, J (reprint author), Beijing Normal Univ, Dept Phys, Beijing 100875, Peoples R China.
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Double-distribution-function discrete Boltzmann model for combustion 期刊论文
COMBUSTION AND FLAME, 2016, 卷号: 164, 页码: 137-151
Authors:  Lin, CD;  Xu, AG;  Zhang, GC;  Li, YJ;  Li, YJ (reprint author), China Univ Min & Technol, State Key Lab GeoMech & Deep Underground Engn, Beijing 100083, Peoples R China.;  Xu, AG (reprint author), Inst Appl Phys & Computat Math, Lab Computat Phys, POB 8009-26, Beijing 100088, Peoples R China.
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Discrete Boltzmann Model  Combustion  Detonation  Nonequilibrium Effects  
Energy-efficient population coding constrains network size of a neuronal array system 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 19369
Authors:  Yu, LC;  Zhang, C;  Liu, LW;  Yu, YG;  Yu, YG (reprint author), Fudan Univ, Ctr Computat Syst Biol, Collaborat Innovat Ctr Brain Sci, Sch Life Sci, Shanghai 200433, Peoples R China.
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Effects of cooperation between translating ribosome and RNA polymerase on termination efficiency of the Rho-independent terminator 期刊论文
NUCLEIC ACIDS RESEARCH, 2016, 卷号: 44, 期号: 6, 页码: 2554-2563
Authors:  Li, R;  Zhang, Q;  Li, JB;  Shi, HL;  Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.;  Li, JB (reprint author), Chinese Acad Sci, Inst Chem, Beijing 100190, Peoples R China.;  Li, JB (reprint author), Natl Ctr Nanosci & Technol, Beijing 100190, Peoples R China.
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Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs) 期刊论文
BMC GENOMICS, 2015, 卷号: 16, 期号: 0, 页码: S8
Authors:  Handelman, SK;  Seweryn, M;  Smith, RM;  Hartmann, K;  Wang, DX;  Pietrzak, M;  Johnson, AD;  Kloczkowski, A;  Sadee, W;  Handelman, SK (reprint author), Ohio State Univ, Coll Med, Ctr Pharmacogen, Graves Hall,330 W 10th Ave, Columbus, OH 43210 USA.
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Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation 期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 365, 期号: 0, 页码: 377-389
Authors:  Li, R;  Xu, LF;  Shi, HL;  Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Polar Effect  The Two-state Promoter  Transcription Terminator  Gene Expression Correlation  Operon Structure  
Multiple-relaxation-time lattice Boltzmann kinetic model for combustion 期刊论文
PHYSICAL REVIEW E, 2015, 卷号: 91, 期号: 4, 页码: 43306
Authors:  Xu, AG;  Lin, CD;  Zhang, GC;  Li, YJ;  Xu, AG (reprint author), Inst Appl Phys & Computat Math, Natl Key Lab Computat Phys, POB 8009-26, Beijing 100088, Peoples R China.
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