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Fast and accurate determination of phase transition temperature via individual generalized canonical ensemble simulation 期刊论文
CHINESE PHYSICS B, 2020, 卷号: 29, 期号: 8, 页码: 80505
Authors:  Shao, Ming-Zhe;  Wang, Yan-Ting;  Zhou, Xin
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MOLECULAR-DYNAMICS SIMULATION  POTENTIAL MODEL  WATER  ICE  CRYSTALLIZATION  INTERFACE  
Poisson-Boltzmann theory with non-linear ion correlations 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2019, 卷号: 31, 期号: 35, 页码: 355101
Authors:  Su, M;  Xu, ZJ;  Wang, YT
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ELECTRIC-DOUBLE-LAYER  INTEGRAL-EQUATION  ELECTROLYTES  INVERSION  
A stability-reversibility map unifies elasticity, plasticity, yielding, and jamming in hard sphere glasses 期刊论文
SCIENCE ADVANCES, 2018, 卷号: 4, 期号: 12, 页码: eaat6387
Authors:  Jin, YL;  Urbani, P;  Zamponi, F;  Yoshino, H
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Criticality  Computer  Dynamics  Liquids  Spin  
Reoptimized UNRES Potential for Protein Model Quality Assessment 期刊论文
GENES, 2018, 卷号: 9, 期号: 12, 页码: 601
Authors:  Faraggi, E;  Krupa, P;  Mozolewska, MA;  Liwo, A;  Kloczkowski, A
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RESIDUE FORCE-FIELD  KNOWLEDGE-BASED POTENTIALS  ACCESSIBLE SURFACE-AREA  STRUCTURE PREDICTION  MOLECULAR-DYNAMICS  STATISTICAL POTENTIALS  STRUCTURE SIMULATIONS  POLYPEPTIDE-CHAINS  SCORING FUNCTION  WEB SERVER  
Dynamic heterogeneity in aqueous ionic solutions 期刊论文
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2018, 卷号: 20, 期号: 33, 页码: 21313-21324
Authors:  Ren, G;  Chen, L;  Wang, YT
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ALKALI-HALIDE SOLUTIONS  STOKES-EINSTEIN RELATION  MOLECULAR-DYNAMICS  CONDUCTIVITY RELAXATION  DIELECTRIC-SPECTROSCOPY  HOMOGENEOUS NUCLEATION  ELECTROLYTE-SOLUTIONS  SUPERCOOLED WATER  LIGHT-SCATTERING  LENNARD-JONES  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Designing a Double-Pole Nanoscale Relay Based on a Carbon Nanotube: A Theoretical Study 期刊论文
PHYSICAL REVIEW APPLIED, 2017, 卷号: 8, 期号: 2, 页码: 24006
Authors:  Mu, WH;  Ou-Yang, ZC;  Dresselhaus, MS;  Mu, WH (reprint author), Wenzhou Med Univ, Sch Biomed Engn, Eye Hosp, Sch Ophthalmol & Optometry, Wenzhou 325027, Peoples R China.;  Mu, WH (reprint author), Chinese Acad Sci, CNITECH, Wenzhou Inst Biomat & Engn, Wenzhou 325001, Peoples R China.
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Smoothing potential energy surface of proteins by hybrid coarse grained approach 期刊论文
CHINESE PHYSICS B, 2017, 卷号: 26, 期号: 5, 页码: 50202
Authors:  Lu, YK;  Zhou, X;  OuYang, ZC;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.
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Coarse-grained  Hybrid Force Field  Enhanced Sampling  Protein Folding  
Study of Friction between Liquid Crystals and Crystalline Surfaces by Molecular Dynamic Simulations 期刊论文
COMMUNICATIONS IN THEORETICAL PHYSICS, 2016, 卷号: 66, 期号: 4, 页码: 467-473
Authors:  Zhang, YW;  Chen, XS;  Chen, W;  Chen, W (reprint author), Chinese Acad Sci, Comp Network Informat Ctr, POB 349, Beijing 100190, Peoples R China.
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Liquid Crystal  Friction  Slip Length  Molecular Dynamics Simulation  
Direct observation of melting in a two-dimensional driven granular system 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 24056
Authors:  Sun, XY;  Li, Y;  Ma, YQ;  Zhang, ZX;  Zhang, ZX (reprint author), Soochow Univ, Ctr Soft Condensed Matter Phys & Interdisciplinar, Suzhou 215006, Peoples R China.;  Ma, YQ (reprint author), Nanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Jiangsu, Peoples R China.;  Ma, YQ (reprint author), Nanjing Univ, Dept Phys, Nanjing 210093, Jiangsu, Peoples R China.;  Zhang, ZX (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China, Beijing 100190, Peoples R China.
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