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Dynamic heterogeneity in aqueous ionic solutions 期刊论文
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2018, 卷号: 20, 期号: 33, 页码: 21313-21324
Authors:  Ren, G;  Chen, L;  Wang, YT
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ALKALI-HALIDE SOLUTIONS  STOKES-EINSTEIN RELATION  MOLECULAR-DYNAMICS  CONDUCTIVITY RELAXATION  DIELECTRIC-SPECTROSCOPY  HOMOGENEOUS NUCLEATION  ELECTROLYTE-SOLUTIONS  SUPERCOOLED WATER  LIGHT-SCATTERING  LENNARD-JONES  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Smoothing potential energy surface of proteins by hybrid coarse grained approach 期刊论文
CHINESE PHYSICS B, 2017, 卷号: 26, 期号: 5, 页码: 50202
Authors:  Lu, YK;  Zhou, X;  OuYang, ZC;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.
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Coarse-grained  Hybrid Force Field  Enhanced Sampling  Protein Folding  
Designing a Double-Pole Nanoscale Relay Based on a Carbon Nanotube: A Theoretical Study 期刊论文
PHYSICAL REVIEW APPLIED, 2017, 卷号: 8, 期号: 2, 页码: 24006
Authors:  Mu, WH;  Ou-Yang, ZC;  Dresselhaus, MS;  Mu, WH (reprint author), Wenzhou Med Univ, Sch Biomed Engn, Eye Hosp, Sch Ophthalmol & Optometry, Wenzhou 325027, Peoples R China.;  Mu, WH (reprint author), Chinese Acad Sci, CNITECH, Wenzhou Inst Biomat & Engn, Wenzhou 325001, Peoples R China.
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Different nanostructures caused by competition of intra- and inter-beta-sheet interactions in hierarchical self-assembly of short peptides 期刊论文
JOURNAL OF COLLOID AND INTERFACE SCIENCE, 2016, 卷号: 464, 页码: 219-228
Authors:  Zhou, P;  Deng, L;  Wang, YT;  Lu, JR;  Xu, H;  Wang, YT (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, 55 East Zhongguancun Road,POB 2735, Beijing 100190, Peoples R China.
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Short Peptides  Self-assembly  Nanostructures  Intermolecular Interactions  Molecular Packing Modes  Molecular Dynamics  
Jarzynski matrix equality: Calculating the free-energy difference by nonequilibrium simulations with an arbitrary initial distribution 期刊论文
PHYSICAL REVIEW E, 2016, 卷号: 93, 期号: 4, 页码: 43312
Authors:  Wan, B;  Yang, C;  Wang, YT;  Zhou, X;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.
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Study of Friction between Liquid Crystals and Crystalline Surfaces by Molecular Dynamic Simulations 期刊论文
COMMUNICATIONS IN THEORETICAL PHYSICS, 2016, 卷号: 66, 期号: 4, 页码: 467-473
Authors:  Zhang, YW;  Chen, XS;  Chen, W;  Chen, W (reprint author), Chinese Acad Sci, Comp Network Informat Ctr, POB 349, Beijing 100190, Peoples R China.
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Liquid Crystal  Friction  Slip Length  Molecular Dynamics Simulation  
Equilibrium sampling by reweighting nonequilibrium simulation trajectories 期刊论文
PHYSICAL REVIEW E, 2016, 卷号: 93, 期号: 3, 页码: 33309
Authors:  Yang, C;  Wan, B;  Xu, S;  Wang, YT;  Zhou, X;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.
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Direct observation of melting in a two-dimensional driven granular system 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 24056
Authors:  Sun, XY;  Li, Y;  Ma, YQ;  Zhang, ZX;  Zhang, ZX (reprint author), Soochow Univ, Ctr Soft Condensed Matter Phys & Interdisciplinar, Suzhou 215006, Peoples R China.;  Ma, YQ (reprint author), Nanjing Univ, Natl Lab Solid State Microstruct, Nanjing 210093, Jiangsu, Peoples R China.;  Ma, YQ (reprint author), Nanjing Univ, Dept Phys, Nanjing 210093, Jiangsu, Peoples R China.;  Zhang, ZX (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China, Beijing 100190, Peoples R China.
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Interplay between Intrinsic Conformational Propensities and Intermolecular Interactions in the Self-Assembly of Short Surfactant-like Peptides Composed of Leucine/Isoleucine 期刊论文
LANGMUIR, 2016, 卷号: 32, 期号: 18, 页码: 4662-4672
Authors:  Zhou, P;  Deng, L;  Wang, YT;  Lu, JR;  Xu, H;  Xu, H (reprint author), China Univ Petr East China, State Key Lab Heavy Oil Proc, 66 Changjiang West Rd, Qingdao, Peoples R China.;  Xu, H (reprint author), China Univ Petr East China, Ctr Bioengn & Biotechnol, 66 Changjiang West Rd, Qingdao, Peoples R China.;  Wang, YT (reprint author), Chinese Acad Sci, Inst Theoret Phys, 55 East Zhongguancun Rd, Beijing, Peoples R China.;  Lu, JR (reprint author), Univ Manchester Inst, Sch Phys & Astron, Phys Biol Lab, Manchester M13 9PL, Lancs, England.
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