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SCI期刊论文 [7]
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史华林 [5]
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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition
期刊论文
MSYSTEMS, 2020, 卷号: 5, 期号: 5, 页码: e00575-20
Authors:
Zhang, Qing
;
Brambilla, Elisa
;
Li, Rui
;
Shi, Hualin
;
Lagomarsino, Marco Cosentino
;
Sclavi, Bianca
Adobe PDF(698Kb)
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View/Download:13/0
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Submit date:2020/11/26
RNA-POLYMERASE AVAILABILITY
ESCHERICHIA-COLI
RIBOSOMAL-RNA
GENE-EXPRESSION
PPGPP
EFFICIENCY
PROMOTERS
SUBUNITS
(P)PPGPP
REVEALS
Optimal Allocation of Bacterial Protein Resources under Nonlethal Protein Maturation Stress
期刊论文
BIOPHYSICAL JOURNAL, 2018, 卷号: 115, 期号: 5, 页码: 896-910
Authors:
Zhang, Q
;
Li, R
;
Li, JB
;
Shi, HL
Adobe PDF(765Kb)
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View/Download:112/0
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Submit date:2018/12/27
ESCHERICHIA-COLI PROTEOME
SIGMA-FACTOR COMPETITION
GENE-EXPRESSION
RNA-POLYMERASE
OXIDATIVE STRESS
GROWTH-INHIBITION
CELL-GROWTH
TRANSLATION
RATES
OVERPRODUCTION
Mean-field analysis of two-species totally asymmetric simple exclusion process (TASEP) with attachment and detachment
期刊论文
CANADIAN JOURNAL OF PHYSICS, 2017, 卷号: 95, 期号: 4, 页码: 370-380
Authors:
Song, MH
;
Zhang, YX
;
Zhang, YX (reprint author), Fudan Univ, Sch Math Sci, Ctr Computat Syst Biol, Shanghai Key Lab Contemporary Appl Math, Shanghai 200433, Peoples R China.
;
Zhang, YX (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China, Beijing 10090, Peoples R China.
Adobe PDF(601Kb)
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Submit date:2017/12/21
Two-species Tasep
Domain Wall
Boundary Layer
Molecular Motor
Phase Transition
Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation
期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2015, 卷号: 365, 期号: 0, 页码: 377-389
Authors:
Li, R
;
Xu, LF
;
Shi, HL
;
Shi, HL (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2016/11/21
Polar Effect
The Two-state Promoter
Transcription Terminator
Gene Expression Correlation
Operon Structure
Theoretical studies on sRNA-mediated regulation in bacteria
期刊论文
CHINESE PHYSICS B, 2015, 卷号: 24, 期号: 12, 页码: 128703
Authors:
Chang, XX
;
Xu, LF
;
Shi, HL
;
Xu, LF (reprint author), Jilin Univ, Dept Phys, Changchun 130012, Peoples R China.
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Submit date:2016/11/21
Srna-mediated Regulation
Kinetic Model
Crosstalk
Quantifying the sequence-function relation in gene silencing by bacterial small RNAs
期刊论文
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 卷号: 108, 期号: 30, 页码: 12473-12478
Authors:
Hao, Y
;
Zhang, ZJ
;
Erickson, DW
;
Huang, M
;
Huang, YW
;
Li, JB
;
Hwa, T
;
Shi, HL
;
Shi, HL (reprint author), Univ Calif San Diego, Div Biol Sci, Mol Biol Sect, La Jolla, CA 92093 USA.
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Submit date:2013/05/17
Small Regulatory Rnas
Small Noncoding Rnas
Messenger-rna
Escherichia-coli
Binding-sites
Soluble-rna
Translational Initiation
Vibrio-cholerae
Outer-membrane
Hfq-binding
A hypercycle theory of proliferation of viruses and resistance to the viruses of transgenic plant
期刊论文
JOURNAL OF THEORETICAL BIOLOGY, 2000, 卷号: 204, 期号: 3, 页码: 453-465
Authors:
Ji, FM
;
Luo, LF
;
Luo, LF , Inner Mongolia Univ, Dept Phys, Hohhot 010021, Peoples R China.
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Submit date:2012/08/29
Tobacco Mosaic-virus
Pathogen-derived Resistance
Strand Rna-synthesis
Coat Protein Gene
Intracellular Kinetics
Messenger-rna
Early Stage
Infection
Replication
Protection