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Trade-offs between effectiveness and cost in bifunctional enzyme circuit with concentration robustness
期刊论文
PHYSICAL REVIEW E, 2020, 卷号: 101, 期号: 1, 页码: 12409
Authors:
Guan, Shaohua
;
Xu, Liufang
;
Zhang, Qing
;
Shi, Hualin
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Submit date:2020/06/16
CHEMICAL-SYSTEMS
GENE-EXPRESSION
PHOSPHORYLATION
NOISE
ORIGINS
GROWTH
SPEED
OMPR
ATP
A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition
期刊论文
MSYSTEMS, 2020, 卷号: 5, 期号: 5, 页码: e00575-20
Authors:
Zhang, Qing
;
Brambilla, Elisa
;
Li, Rui
;
Shi, Hualin
;
Lagomarsino, Marco Cosentino
;
Sclavi, Bianca
Adobe PDF(698Kb)
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View/Download:9/0
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Submit date:2020/11/26
RNA-POLYMERASE AVAILABILITY
ESCHERICHIA-COLI
RIBOSOMAL-RNA
GENE-EXPRESSION
PPGPP
EFFICIENCY
PROMOTERS
SUBUNITS
(P)PPGPP
REVEALS
Covering Problems and Core Percolations on Hypergraphs
期刊论文
PHYSICAL REVIEW LETTERS, 2020, 卷号: 124, 期号: 24, 页码: 248301
Authors:
Coutinho, Bruno Coelho
;
Wu, Ang-Kun
;
Zhou, Hai-Jun
;
Liu, Yang-Yu
Adobe PDF(507Kb)
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Submit date:2020/11/26
SET
Enhanced transport of inertial Levy flights in rough tilted periodic potential
期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2019, 页码: 33211
Authors:
Liu, J
;
Li, FF
;
Zhu, YH
;
Li, BH
Adobe PDF(1371Kb)
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Submit date:2019/07/19
ENERGY LANDSCAPE
DIFFUSION
DRIVEN
STATES
DCA for genome-wide epistasis analysis: the statistical genetics perspective
期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:
Gao, Chen-Yi
;
Cecconi, Fabio
;
Vulpiani, Angelo
;
Zhou, Hai-Jun
;
Aurell, Erik
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Submit date:2020/11/26
DIRECT-COUPLING ANALYSIS
PROTEIN-STRUCTURE
CONTACTS
HIV
IDENTIFICATION
RECOMBINATION
LINKAGE
LANDSCAPE
INFERENCE
MODEL
Behaviors of Glioblastoma Cells in in Vitro Microenvironments
期刊论文
SCIENTIFIC REPORTS, 2019, 卷号: 9, 页码: 85
Authors:
Diao, WW
;
Tong, XZ
;
Yang, C
;
Zhang, FR
;
Bao, C
;
Chen, H
;
Liu, LY
;
Li, M
;
Ye, FF
;
Fan, QH
;
Wang, JF
;
Ou-Yang, ZC
Adobe PDF(2650Kb)
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View/Download:119/0
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Submit date:2019/07/19
MATRIX
GLIOMA
MIGRATION
BRAIN
MORPHOGENESIS
INCREASE
GROWTH
CANCER
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
会议论文
BMC BIOINFORMATICS, Wuhan, PEOPLES R CHINA, JAN 14-16, 2019
Authors:
Wang, C
;
Wei, Y
;
Zhang, HC
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
Adobe PDF(1618Kb)
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Submit date:2019/07/24
TERTIARY STRUCTURES
FRAGMENTS
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 135
Authors:
Wang, C
;
Wei, Y
;
Zhang, HC
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
Adobe PDF(1618Kb)
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View/Download:66/0
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Submit date:2019/07/19
TERTIARY STRUCTURES
FRAGMENTS
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning
期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 537
Authors:
Zhang, Haicang
;
Zhang, Qi
;
Ju, Fusong
;
Zhu, Jianwei
;
Gao, Yujuan
;
Xie, Ziwei
;
Deng, Minghua
;
Sun, Shiwei
;
Zheng, Wei-Mou
;
Bu, Dongbo
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View/Download:71/0
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Submit date:2020/06/16
COUPLING ANALYSIS
SEQUENCE
EVOLUTIONARY
INFORMATION
NETWORKS
RANK
DCA for genome-wide epistasis analysis: the statistical genetics perspective
期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:
Gao, CY
;
Cecconi, F
;
Vulpiani, A
;
Zhou, HJ
;
Aurell, E
Adobe PDF(1652Kb)
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View/Download:112/1
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Submit date:2019/07/19
DIRECT-COUPLING ANALYSIS
PROTEIN-STRUCTURE
CONTACTS
HIV
IDENTIFICATION
RECOMBINATION
LINKAGE
LANDSCAPE
INFERENCE
MODEL