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DCA for genome-wide epistasis analysis: the statistical genetics perspective 期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:  Gao, CY;  Cecconi, F;  Vulpiani, A;  Zhou, HJ;  Aurell, E
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DIRECT-COUPLING ANALYSIS  PROTEIN-STRUCTURE  CONTACTS  HIV  IDENTIFICATION  RECOMBINATION  LINKAGE  LANDSCAPE  INFERENCE  MODEL  
Correlation-compressed direct-coupling analysis 期刊论文
PHYSICAL REVIEW E, 2018, 卷号: 98, 期号: 3, 页码: 32407
Authors:  Gao, CY;  Zhou, HJ;  Aurell, E
Favorite  |  View/Download：2/0  |  Submit date：2018/12/27
STRUCTURE PREDICTION  PROTEIN-STRUCTURE  CONTACTS  IDENTIFICATION  MODEL  SEQUENCES  FAMILIES  HUMANS  
Protection-against-water-attack determined difference between strengths of backbone hydrogen bonds in kinesin's neck zipper region 期刊论文
CHINESE PHYSICS B, 2018, 卷号: 27, 期号: 2, 页码: 28704
Authors:  Qin, JY;  Geng, YZ;  Lu, G;  Ji, Q;  Fang, HP
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MOLECULAR-DYNAMICS  MOTOR  PROTEINS  LINKER  BINDING  DOMAIN  FORCE  
Correlation-compressed direct-coupling analysis 期刊论文
PHYSICAL REVIEW E, 2018, 卷号: 98, 期号: 3, 页码: 32407
Authors:  Gao, CY;  Zhou, HJ;  Aurell, E
Favorite  |  View/Download：2/0  |  Submit date：2018/12/26
STRUCTURE PREDICTION  PROTEIN-STRUCTURE  CONTACTS  IDENTIFICATION  MODEL  SEQUENCES  FAMILIES  HUMANS  
Template-based and free modeling of I-TASSER and QUARK pipelines using predicted contact maps in CASP12 期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2018, 卷号: 86, 页码: 136-151
Authors:  Zhang, CX;  Mortuza, SM;  He, BJ;  Wang, YT;  Zhang, Y
Favorite  |  View/Download：3/0  |  Submit date：2018/12/27
PROTEIN-STRUCTURE PREDICTION  RESIDUE CONTACTS  SEQUENCE  ALIGNMENTS  ACCURACY  NETWORKS  ROLL  
Protection-against-water-attack determined difference between strengths of backbone hydrogen bonds in kinesin's neck zipper region 期刊论文
CHINESE PHYSICS B, 2018, 卷号: 27, 期号: 2, 页码: 28704
Authors:  Qin, JY;  Geng, YZ;  Lu, G;  Ji, Q;  Fang, HP
Favorite  |  View/Download：0/0  |  Submit date：2019/07/19
MOLECULAR-DYNAMICS  MOTOR  PROTEINS  LINKER  BINDING  DOMAIN  FORCE  
Comparing NMR and X-ray protein structure: Lindemann-like parameters and NMR disorder 期刊论文
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2018, 卷号: 36, 期号: 9, 页码: 2331-2341
Authors:  Faraggi, E;  Dunker, AK;  Sussman, JL;  Kloczkowski, A
Favorite  |  View/Download：6/0  |  Submit date：2018/12/27
BACKBONE TORSION ANGLES  MAJOR URINARY PROTEIN  INTRINSIC DISORDER  STRUCTURE PREDICTION  SECONDARY STRUCTURE  CRYSTAL-STRUCTURE  DYNAMICS  DIFFRACTION  CRYSTALLOGRAPHY  RECOGNITION  
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Initiation Mechanism of Kinesin's Neck Linker Docking Process 期刊论文
CHINESE PHYSICS LETTERS, 2017, 卷号: 34, 期号: 2, 页码: 28701
Authors:  Geng, YZ;  Zhang, H;  Lyu, G;  Ji, Q;  Ji, Q (reprint author), Hebei Univ Technol, Inst Biophys, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Hebei Univ Technol, Sch Sci, Tianjin 300401, Peoples R China.;  Ji, Q (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Feedback traps for virtual potentials 期刊论文
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 2017, 卷号: 375, 期号: 2088, 页码: 20160217
Authors:  Gavrilov, M;  Bechhoefer, J;  Bechhoefer, J (reprint author), Simon Fraser Univ, Dept Phys, Burnaby, BC V5A 1S6, Canada.;  Bechhoefer, J (reprint author), Kavli Inst Theoret Phys China CAS, Beijing 100190, Peoples R China.
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Feedback Trap  Information Engine  Landauer Limit  Maxwell Demon  Optimal Control  Stochastic Work