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SCI期刊论文 [67]
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DCA for genome-wide epistasis analysis: the statistical genetics perspective
期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:
Gao, CY
;
Cecconi, F
;
Vulpiani, A
;
Zhou, HJ
;
Aurell, E
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Submit date:2019/07/19
DIRECT-COUPLING ANALYSIS
PROTEIN-STRUCTURE
CONTACTS
HIV
IDENTIFICATION
RECOMBINATION
LINKAGE
LANDSCAPE
INFERENCE
MODEL
Kinked Entropy and Discontinuous Microcanonical Spontaneous Symmetry Breaking
期刊论文
PHYSICAL REVIEW LETTERS, 2019, 卷号: 122, 期号: 16, 页码: 160601
Authors:
Zhou, HJ
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Submit date:2019/07/19
DROPLETS
Weighted community detection and data clustering using message passing
期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2018, 页码: 33405
Authors:
Shi, C
;
Liu, YC
;
Zhang, P
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Submit date:2018/12/27
NETWORKS
MODEL
Correlation-compressed direct-coupling analysis
期刊论文
PHYSICAL REVIEW E, 2018, 卷号: 98, 期号: 3, 页码: 32407
Authors:
Gao, CY
;
Zhou, HJ
;
Aurell, E
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Submit date:2018/12/27
STRUCTURE PREDICTION
PROTEIN-STRUCTURE
CONTACTS
IDENTIFICATION
MODEL
SEQUENCES
FAMILIES
HUMANS
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
Authors:
Zhu, JW
;
Zhang, HC
;
Li, SC
;
Wang, C
;
Kong, LP
;
Sun, SW
;
Zheng, WM
;
Bu, DB
;
Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing 100190, Peoples R China.
;
Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2017/12/21
Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis
期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:
Skwark, MJ
;
Croucher, NJ
;
Puranen, S
;
Chewapreecha, C
;
Pesonen, M
;
Xu, YY
;
Turner, P
;
Harris, SR
;
Beres, SB
;
Musser, JM
;
Parkhill, J
;
Bentley, SD
;
Aurell, E
;
Corander, J
;
Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.
;
Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.
;
Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.
;
Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.
;
Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.
;
Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.
;
Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Submit date:2017/12/21
Irreversible Markov chain Monte Carlo algorithm for self-avoiding walk
期刊论文
FRONTIERS OF PHYSICS, 2017, 卷号: 12, 期号: 1, 页码: 120503
Authors:
Hu, H
;
Chen, XS
;
Deng, YJ
;
Deng, YJ (reprint author), Univ Sci & Technol China, Natl Lab Phys Sci Microscale, Hefei 230026, Peoples R China.
;
Deng, YJ (reprint author), Univ Sci & Technol China, Dept Modern Phys, Hefei 230026, Peoples R China.
;
Deng, YJ (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2017/12/21
Monte Carlo Algorithms
Self-avoiding Walk
Irreversible
Balance Condition
Completeness of Community Structure in Networks
期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7, 页码: 5269
Authors:
Xie, JR
;
Zhang, P
;
Zhang, HF
;
Wang, BH
;
Wang, BH (reprint author), Univ Sci & Technol China, Dept Modern Phys, Hefei 230026, Peoples R China.
;
Zhang, P (reprint author), Chinese Acad Sci, Inst Theoret Phys, CAS Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2017/12/21
Mother canonical tensor model
期刊论文
CLASSICAL AND QUANTUM GRAVITY, 2017, 卷号: 34, 期号: 14, 页码: 145009
Authors:
Narain, G
;
Sasakura, N
;
Narain, G (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China KITPC, Beijing 100190, Peoples R China.
;
Narain, G (reprint author), Chinese Acad Sci, Key Lab Theoret Phys, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Submit date:2017/12/21
Canonical Tensor Model
Hamilton-jacobi
Constraints
Quantisation
Exact Solutions
NeBcon: protein contact map prediction using neural network training coupled with naiive Bayes classifiers
期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 15, 页码: 2296-2306
Authors:
He, BJ
;
Mortuza, SM
;
Wang, YT
;
Shen, HB
;
Zhang, Y
;
Zhang, Y (reprint author), Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA.
;
Zhang, Y (reprint author), Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA.
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Submit date:2017/12/21