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DCA for genome-wide epistasis analysis: the statistical genetics perspective 期刊论文
PHYSICAL BIOLOGY, 2019, 卷号: 16, 期号: 2, 页码: 26002
Authors:  Gao, CY;  Cecconi, F;  Vulpiani, A;  Zhou, HJ;  Aurell, E
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DIRECT-COUPLING ANALYSIS  PROTEIN-STRUCTURE  CONTACTS  HIV  IDENTIFICATION  RECOMBINATION  LINKAGE  LANDSCAPE  INFERENCE  MODEL  
Kinked Entropy and Discontinuous Microcanonical Spontaneous Symmetry Breaking 期刊论文
PHYSICAL REVIEW LETTERS, 2019, 卷号: 122, 期号: 16, 页码: 160601
Authors:  Zhou, HJ
Favorite  |  View/Download：2/0  |  Submit date：2019/07/19
DROPLETS  
Weighted community detection and data clustering using message passing 期刊论文
JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2018, 页码: 33405
Authors:  Shi, C;  Liu, YC;  Zhang, P
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NETWORKS  MODEL  
Correlation-compressed direct-coupling analysis 期刊论文
PHYSICAL REVIEW E, 2018, 卷号: 98, 期号: 3, 页码: 32407
Authors:  Gao, CY;  Zhou, HJ;  Aurell, E
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STRUCTURE PREDICTION  PROTEIN-STRUCTURE  CONTACTS  IDENTIFICATION  MODEL  SEQUENCES  FAMILIES  HUMANS  
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts 期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
Authors:  Zhu, JW;  Zhang, HC;  Li, SC;  Wang, C;  Kong, LP;  Sun, SW;  Zheng, WM;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing 100190, Peoples R China.;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis 期刊论文
PLOS GENETICS, 2017, 卷号: 13, 期号: 2, 页码: e1006508
Authors:  Skwark, MJ;  Croucher, NJ;  Puranen, S;  Chewapreecha, C;  Pesonen, M;  Xu, YY;  Turner, P;  Harris, SR;  Beres, SB;  Musser, JM;  Parkhill, J;  Bentley, SD;  Aurell, E;  Corander, J;  Corander, J (reprint author), Wellcome Trust Sanger Inst, Pathogen Gen, Cambridge, England.;  Aurell, E (reprint author), KTH Royal Inst Technol, Dept Computat Biol, Stockholm, Sweden.;  Aurell, E (reprint author), Aalto Univ, Dept Appl Phys & Comp Sci, Espoo, Finland.;  Aurell, E (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing, Peoples R China.;  Corander, J (reprint author), Univ Helsinki, Dept Math & Stat, Helsinki, Finland.;  Corander, J (reprint author), Univ Oslo, Dept Biostat, Oslo, Norway.;  Corander, J (reprint author), Univ Cambridge, Dept Vet Med, Cambridge, England.
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Irreversible Markov chain Monte Carlo algorithm for self-avoiding walk 期刊论文
FRONTIERS OF PHYSICS, 2017, 卷号: 12, 期号: 1, 页码: 120503
Authors:  Hu, H;  Chen, XS;  Deng, YJ;  Deng, YJ (reprint author), Univ Sci & Technol China, Natl Lab Phys Sci Microscale, Hefei 230026, Peoples R China.;  Deng, YJ (reprint author), Univ Sci & Technol China, Dept Modern Phys, Hefei 230026, Peoples R China.;  Deng, YJ (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Monte Carlo Algorithms  Self-avoiding Walk  Irreversible  Balance Condition  
Completeness of Community Structure in Networks 期刊论文
SCIENTIFIC REPORTS, 2017, 卷号: 7, 页码: 5269
Authors:  Xie, JR;  Zhang, P;  Zhang, HF;  Wang, BH;  Wang, BH (reprint author), Univ Sci & Technol China, Dept Modern Phys, Hefei 230026, Peoples R China.;  Zhang, P (reprint author), Chinese Acad Sci, Inst Theoret Phys, CAS Key Lab Theoret Phys, Beijing 100190, Peoples R China.
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Mother canonical tensor model 期刊论文
CLASSICAL AND QUANTUM GRAVITY, 2017, 卷号: 34, 期号: 14, 页码: 145009
Authors:  Narain, G;  Sasakura, N;  Narain, G (reprint author), Chinese Acad Sci, Kavli Inst Theoret Phys China KITPC, Beijing 100190, Peoples R China.;  Narain, G (reprint author), Chinese Acad Sci, Key Lab Theoret Phys, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Canonical Tensor Model  Hamilton-jacobi  Constraints  Quantisation  Exact Solutions  
NeBcon: protein contact map prediction using neural network training coupled with naiive Bayes classifiers 期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 15, 页码: 2296-2306
Authors:  He, BJ;  Mortuza, SM;  Wang, YT;  Shen, HB;  Zhang, Y;  Zhang, Y (reprint author), Univ Michigan, Dept Computat Med & Bioinformat, Ann Arbor, MI 48109 USA.;  Zhang, Y (reprint author), Univ Michigan, Dept Biol Chem, Ann Arbor, MI 48109 USA.
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