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Proofreading of DNA polymerase: a new kinetic model with higher-order terminal effects 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2017, 卷号: 29, 期号: 2, 页码: 25101
Authors:  Song, YS;  Shu, YG;  Zhou, X;  Ou-Yang, ZC;  Li, M;  Li, M (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China.
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Dna Polymerase  Proofreading  Kinetics  Fidelity  Higher-order Terminal Effects  
Molecular dynamics simulation study of the "stay or leave" problem for two magnesium ions in gene transcription 期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2017, 卷号: 85, 期号: 6, 页码: 1002-1007
Authors:  Wu, SG;  Wu, SG (reprint author), Sichuan Normal Univ, Coll Chem & Mat Sci, Chengdu 610066, Peoples R China.
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Molecular Dynamics Simulation  T7 Rna Polymerase  Magnesium Ion  Transcription Mechanism  Free Energy  
Time and frequency structure of causal correlation networks in the China bond market 期刊论文
EUROPEAN PHYSICAL JOURNAL B, 2017, 卷号: 90, 期号: 7, 页码: 137
Authors:  Wang, ZX;  Yan, Y;  Chen, XS;  Yan, Y (reprint author), Univ Chinese Acad Sci, Sch Econ & Management, Beijing 100080, Peoples R China.;  Yan, Y (reprint author), Chinese Acad Sci, Res Ctr Fictitious Econ & Data Sci, Beijing 100190, Peoples R China.;  Yan, Y (reprint author), Chinese Acad Sci, Key Lab Big Data Min & Knowledge Management, Beijing 100190, Peoples R China.
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MQAPsingle: A quasi single-model approach for estimation of the quality of individual protein structure models 期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2016, 卷号: 84, 期号: 8, 页码: 1021-1028
Authors:  Pawlowski, M;  Kozlowski, L;  Kloczkowski, A;  Kloczkowski, A (reprint author), Nationwide Childrens Hosp, Res Inst, Battelle Ctr Math Med, 700 Childrens Dr, Columbus, OH 43205 USA.
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Model Quality Assessment  Protein Structure  Protein Prediction  Mqap  Single-model Mqap  Model Correctness  Casp10  
Advances in the mechanism of mechanochemical coupling of kinesin 期刊论文
ACTA PHYSICA SINICA, 2016, 卷号: 65, 期号: 18, 页码: 188702
Authors:  Li, M;  Ouyang, ZC;  Shu, YG;  Shu, YG (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Kinesin  Single Molecule Technology  Mechanochemical Coupling  
A general theory of kinetics and thermodynamics of steady-state copolymerization 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2015, 卷号: 27, 期号: 23, 页码: 235105
Authors:  Shu, YG;  Song, YS;  Ou-Yang, ZC;  Li, M;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Zhong Guan Cun East St 55,POB 2735, Beijing 100190, Peoples R China.
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Steady-state Copolymerization  Depropagation  Higher-order Terminal Model  Kinetics  Thermodynamics  
Probing gravitational dark matter 期刊论文
JOURNAL OF COSMOLOGY AND ASTROPARTICLE PHYSICS, 2015, 期号: 3, 页码: 52
Authors:  Ren, J;  He, HJ;  Ren, J (reprint author), Tsinghua Univ, Inst Modern Phys, Beijing 100084, Peoples R China.
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Dark Matter Theory  Quantum Gravity Phenomenology  
Mechano-chemical selections of two competitive unfolding pathways of a single DNA i-motif 期刊论文
CHINESE PHYSICS B, 2014, 卷号: 23, 期号: 6, 页码: 68702
Authors:  Xu, Y;  Chen, H;  Qu, YJ;  Efremov, AK;  Li, M;  Ouyang, ZC;  Liu, DS;  Yan, J;  Liu, DS (reprint author), Tsinghua Univ, Minist Educ, Dept Chem, Key Lab Organ Optoelect & Mol Engn, Beijing 100084, Peoples R China.
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G-quadruplex  Mechanical Stability  Rna-polymerase  Stranded-dna  Double Helix  B-dna  Molecule  Force  Proteins  Dynamics  
Recent theoretical advances in elasticity of membranes following Helfrich's spontaneous curvature model 期刊论文
ADVANCES IN COLLOID AND INTERFACE SCIENCE, 2014, 卷号: 208, 期号: -, 页码: 66-75
Authors:  Tu, ZC;  Ou-Yang, ZC;  Tu, ZC (reprint author), Beijing Normal Univ, Dept Phys, Beijing 100875, Peoples R China.
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Red-blood-cell  Assembled Lipid Tubules  Gaussian Curvature  Axisymmetrical Vesicles  Shape Transformations  Helical Ribbons  Mediated Interactions  Fluid Membranes  Equilibrium-configurations  Willmore Conjecture