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Advances in the study of the mechanochemical coupling of kinesin 期刊论文
INTERNATIONAL JOURNAL OF MODERN PHYSICS B, 2018, 卷号: 32, 期号: 18, 页码: 1840001
Authors:  Li, M;  Ou-Yang, ZC;  Shu, YG
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SQUID GIANT-AXON  BOVINE BRAIN KINESIN  HAND-OVER-HAND  CRYSTAL-STRUCTURE  MOTOR DOMAIN  NECK LINKER  8-NM STEP  MOLECULAR MOTORS  OPTICAL-TRAP  FORCE  
Proofreading of DNA polymerase: a new kinetic model with higher-order terminal effects 期刊论文
JOURNAL OF PHYSICS-CONDENSED MATTER, 2017, 卷号: 29, 期号: 2, 页码: 25101
Authors:  Song, YS;  Shu, YG;  Zhou, X;  Ou-Yang, ZC;  Li, M;  Li, M (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China.
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Dna Polymerase  Proofreading  Kinetics  Fidelity  Higher-order Terminal Effects  
Designing a Double-Pole Nanoscale Relay Based on a Carbon Nanotube: A Theoretical Study 期刊论文
PHYSICAL REVIEW APPLIED, 2017, 卷号: 8, 期号: 2, 页码: 24006
Authors:  Mu, WH;  Ou-Yang, ZC;  Dresselhaus, MS;  Mu, WH (reprint author), Wenzhou Med Univ, Sch Biomed Engn, Eye Hosp, Sch Ophthalmol & Optometry, Wenzhou 325027, Peoples R China.;  Mu, WH (reprint author), Chinese Acad Sci, CNITECH, Wenzhou Inst Biomat & Engn, Wenzhou 325001, Peoples R China.
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Smoothing potential energy surface of proteins by hybrid coarse grained approach 期刊论文
CHINESE PHYSICS B, 2017, 卷号: 26, 期号: 5, 页码: 50202
Authors:  Lu, YK;  Zhou, X;  OuYang, ZC;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.
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Coarse-grained  Hybrid Force Field  Enhanced Sampling  Protein Folding  
Advances in the mechanism of mechanochemical coupling of kinesin 期刊论文
ACTA PHYSICA SINICA, 2016, 卷号: 65, 期号: 18, 页码: 188702
Authors:  Li, M;  Ouyang, ZC;  Shu, YG;  Shu, YG (reprint author), Univ Chinese Acad Sci, Sch Phys Sci, Beijing 100049, Peoples R China.;  Shu, YG (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Kinesin  Single Molecule Technology  Mechanochemical Coupling  
Systematically Constructing Kinetic Transition Network in Polypeptide from Top to Down: Trajectory Mapping 期刊论文
PLOS ONE, 2015, 卷号: 10, 期号: 5, 页码: UNSP e0125932
Authors:  Gong, LC;  Zhou, X;  Ouyang, ZC;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys, Beijing 100049, Peoples R China.
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Reweighted ensemble dynamics simulations: Theory, improvement, and application 期刊论文
CHINESE PHYSICS B, 2015, 卷号: 24, 期号: 6, 页码: 60202
Authors:  Gong, LC;  Zhou, X;  Ouyang, ZC;  Zhou, X (reprint author), Univ Chinese Acad Sci, Sch Phys, Beijing 100049, Peoples R China.
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Ensemble Dynamics Simulations  Peptides  Enhanced Sampling  Metastable States  
Recent theoretical advances in elasticity of membranes following Helfrich's spontaneous curvature model 期刊论文
ADVANCES IN COLLOID AND INTERFACE SCIENCE, 2014, 卷号: 208, 期号: -, 页码: 66-75
Authors:  Tu, ZC;  Ou-Yang, ZC;  Tu, ZC (reprint author), Beijing Normal Univ, Dept Phys, Beijing 100875, Peoples R China.
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Red-blood-cell  Assembled Lipid Tubules  Gaussian Curvature  Axisymmetrical Vesicles  Shape Transformations  Helical Ribbons  Mediated Interactions  Fluid Membranes  Equilibrium-configurations  Willmore Conjecture  
Mechano-chemical selections of two competitive unfolding pathways of a single DNA i-motif 期刊论文
CHINESE PHYSICS B, 2014, 卷号: 23, 期号: 6, 页码: 68702
Authors:  Xu, Y;  Chen, H;  Qu, YJ;  Efremov, AK;  Li, M;  Ouyang, ZC;  Liu, DS;  Yan, J;  Liu, DS (reprint author), Tsinghua Univ, Minist Educ, Dept Chem, Key Lab Organ Optoelect & Mol Engn, Beijing 100084, Peoples R China.
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G-quadruplex  Mechanical Stability  Rna-polymerase  Stranded-dna  Double Helix  B-dna  Molecule  Force  Proteins  Dynamics  
Effect of Side-Chain Length on Structural and Dynamic Properties of Ionic Liquids with Hydroxyl Cationic Tails 期刊论文
JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 卷号: 118, 期号: 13, 页码: 3642-3649
Authors:  Wei, K;  Deng, L;  Wang, YT;  Ou-Yang, ZC;  Wang, GD;  Wang, YT (reprint author), Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, 55 East Zhongguancun Rd,POB 2735, Beijing 100190, Peoples R China.
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Spatial Heterogeneity  Nanoscale Organization  Simulation  Electrochemistry  Lubricant  Nitrate  Acid  Nanoparticles  Electrolytes  Aggregation