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Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 135
Authors:  Wang, C;  Wei, Y;  Zhang, HC;  Kong, LP;  Sun, SW;  Zheng, WM;  Bu, DB
Favorite  |  View/Download:0/0  |  Submit date:2019/07/19
TERTIARY STRUCTURES  FRAGMENTS  
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling 会议论文
BMC BIOINFORMATICS, Wuhan, PEOPLES R CHINA, JAN 14-16, 2019
Authors:  Wang, C;  Wei, Y;  Zhang, HC;  Kong, LP;  Sun, SW;  Zheng, WM;  Bu, DB
Favorite  |  View/Download:0/0  |  Submit date:2019/07/24
TERTIARY STRUCTURES  FRAGMENTS  
蛋白质三级结构预测算法综述 期刊论文
计算机学报, 2018, 卷号: 41, 期号: 04, 页码: 760-779
Authors:  王超;  朱建伟;  张海仓;  巩海娥;  郑伟谋;  卜东波
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蛋白质结构  同源建模  归范法  从头预测法  能量函数  动态规划  线性规划  
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts 期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
Authors:  Zhu, JW;  Zhang, HC;  Li, SC;  Wang, C;  Kong, LP;  Sun, SW;  Zheng, WM;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing 100190, Peoples R China.;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Improving prediction of burial state of residues by exploiting correlation among residues 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 70
Authors:  Gong, HE;  Zhang, HC;  Zhu, JW;  Wang, C;  Sun, SW;  Zheng, WM;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Proc, Beijing 100190, Peoples R China.;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100190, Peoples R China.
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Protein Structure  Burial States Of Residue  Conditional Random Field  Residue Correlation  
蛋白质中残基远程相互作用预测算法研究综述 期刊论文
计算机研究与发展, 2017, 卷号: 54, 期号: 01, 页码: 1-19
Authors:  张海仓;  高玉娟;  邓明华;  郑伟谋;  卜东波
Favorite  |  View/Download:0/0  |  Submit date:2019/09/05
残基远程相互作用预测  蛋白质三级结构预测  图模型  共进化  机器学习  
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2016, 卷号: 472, 期号: 1, 页码: 217-222
Authors:  Zhang, HC;  Gao, YJ;  Deng, MH;  Wang, C;  Zhu, JW;  Li, SC;  Zheng, WM;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing, Peoples R China.;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China.
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Protein Contacts Prediction  Correlation Analysis  Background Correlation Removal  Low-rank And Sparse Matrix Decomposition  
FALCON@home: a high-throughput protein structure prediction server based on remote homologue recognition 期刊论文
BIOINFORMATICS, 2016, 卷号: 32, 期号: 3, 页码: 462-464
Authors:  Wang, C;  Zhang, HC;  Zheng, WM;  Xu, D;  Zhu, JW;  Wang, B;  Ning, K;  Sun, SW;  Li, SC;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing, Peoples R China.;  Li, SC (reprint author), City Univ Hong Kong, Dept Comp Sci, Kowloon, Hong Kong, Peoples R China.
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Insights into the transmission of respiratory infectious diseases through empirical human contact networks 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 31484
Authors:  Huang, CL;  Liu, XW;  Sun, SW;  Li, SC;  Deng, MH;  He, GX;  Zhang, HC;  Wang, C;  Zhou, Y;  Zhao, YL;  Bu, DB;  Bu, DB (reprint author), Chinese Acad Sci, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing, Peoples R China.;  Bu, DB (reprint author), Chinese Acad Sci, State Key Lab Theoret Phys, Beijing, Peoples R China.
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Incorporating Ab Initio energy into threading approaches for protein structure prediction 期刊论文
BMC BIOINFORMATICS, 2011, 卷号: 12, 期号: *, 页码: S54
Authors:  Shao, MF;  Wang, S;  Wang, C;  Yuan, XY;  Li, SC;  Zheng, WM;  Bu, DB;  Zheng, WM (reprint author), Chinese Acad Sci, Inst Theoret Phys, Beijing 100080, Peoples R China.
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Fold Recognition  Alignment  Generation  Sequences  Fragments  Profiles